RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GPR107Q5VW38 600 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 COLGALT1Q8NBJ5 622 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 ZNF75CPQ92670 426 aaPredicted RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 SYN2Q92777 582 aaPredicted RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 PMM1Q92871 262 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 DPY30Q9C005 99 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 UBE2OQ9C0C9 1292 aaKnown RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 NCKIPSDQ9NZQ3 722 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 CDK12Q9NYV4 1490 aaPredicted RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 PDHXO00330 501 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PLOD3O60568 738 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 USP12O75317 370 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 FSBPO95073 299 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 ADRA2BP18089 450 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 CASP5P51878 434 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 CCDC80Q76M96 950 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 OSCP1Q8WVF1 389 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 BTBD9Q96Q07 612 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 ERGIC2Q96RQ1 377 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 VPS45Q9NRW7 570 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 CRB1P82279 1406 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 DDX3XO00571 662 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPG11-210ENST00000558319 SCAMP1O15126 338 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PSIP1O75475 530 aaKnown RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 EGFRP00533 1210 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 MAPK1P28482 360 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 ZNF844Q08AG5 666 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 EXOC3L1Q86VI1 746 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 ACTRT1Q8TDG2 376 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 LRRC40Q9H9A6 602 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 MRASO14807 208 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 OR6B1O95007 311 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 SEC24AO95486 1093 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 SSTR1P30872 391 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 FMO4P31512 558 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PTDSS1P48651 473 aaKnown RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 PTSQ03393 145 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 SRSF11Q05519 484 aaKnown RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 EPS8Q12929 822 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 SGCGQ13326 291 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PDK3Q15120 406 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PKN1Q16512 942 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 SLC39A12Q504Y0 691 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 OR7A2PQ8NGA2 310 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 FBXO30Q8TB52 745 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 FNIP1Q8TF40 1166 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PPP1R2P1Q96PQ5 205 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 GLIS2Q9BZE0 524 aaPredicted RBP14.22□□□□□ -0.13
SPG11-210ENST00000558319 OSBPL6Q9BZF3 934 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 AP4E1Q9UPM8 1137 aa14.22□□□□□ -0.13
SPG11-210ENST00000558319 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 FAM47E-STBD1D6RA91 191 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 GRIN3BO60391 1043 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 RPL21P46778 160 aaKnown RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 NPTX2P47972 431 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 TTLL9Q3SXZ7 439 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 ITFG1Q8TB96 612 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 SLC9A7Q96T83 725 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 POLR1DQ9Y2S0 133 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 SH3GLB1Q9Y371 365 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 TRIM17Q9Y577 477 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 ME2P23368 584 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 WARSP23381 471 aaKnown RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 MZT2BQ6NZ67 158 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 LENG1Q96BZ8 264 aaPredicted RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 C9orf16Q9BUW7 83 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 PLEKHG2Q9H7P9 1386 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 AP5Z1O43299 807 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 SLC25A27O95847 323 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 PAICSP22234 425 aaKnown RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 RPA3P35244 121 aaPredicted RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 MTTPP55157 894 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 MPP3Q13368 585 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 ALX1Q15699 326 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 ZNF677Q86XU0 584 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 CAMKK2Q96RR4 588 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
SPG11-210ENST00000558319 TRPM5Q9NZQ8 1165 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 EFR3BQ9Y2G0 817 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 PCDHGA3Q9Y5H0 932 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 CLASP1Q7Z460 1538 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 H7C4K7 107 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 CTDNEP1O95476 244 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 ALDH2P05091 517 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 OR1E1P30953 314 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 CRADDP78560 199 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 HIPK1Q86Z02 1210 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 TSPAN14Q8NG11 270 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.13
SPG11-210ENST00000558319 C2orf73Q8N5S3 287 aaPredicted RBP14.21□□□□□ -0.14
SPG11-210ENST00000558319 MRPL48Q96GC5 212 aaKnown RBP14.21□□□□□ -0.14
SPG11-210ENST00000558319 MID1IP1Q9NPA3 183 aa14.21□□□□□ -0.14
SPG11-210ENST00000558319 ZNF180Q9UJW8 692 aa14.21□□□□□ -0.14
SPG11-210ENST00000558319 ACOT9Q9Y305 439 aa14.21□□□□□ -0.14
SPG11-210ENST00000558319 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.14
SPG11-210ENST00000558319 TSPAN8P19075 237 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CYP2F1P24903 491 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SLC25A3Q00325 362 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms