RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 GEMIN4P57678 1058 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 FOXK2Q01167 660 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 KLHL30Q0D2K2 578 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 LMAN2Q12907 356 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 GPS2Q13227 327 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CLEC16AQ2KHT3 1053 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 AASDHQ4L235 1098 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 FAM133BQ5BKY9 247 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 ICE2Q659A1 982 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 RAP1GAP2Q684P5 730 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 NAIF1Q69YI7 327 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 PKN3Q6P5Z2 889 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 RFWD3Q6PCD5 774 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 ZNF783Q6ZMS7 281 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MMS22LQ6ZRQ5 1243 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 STRADAQ7RTN6 431 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 RNF214Q8ND24 703 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 C3orf20Q8ND61 904 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MDGA1Q8NFP4 955 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 NETO1Q8TDF5 533 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 SYN2Q92777 582 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 SIPA1Q96FS4 1042 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 NPY6RQ99463 290 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 EIF3CQ99613 913 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 C11orf70Q9BRQ4 267 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MRPL47Q9HD33 250 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 PARVAQ9NVD7 372 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CACNA2D2Q9NY47 1150 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 LCMT1Q9UIC8 334 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 SCINQ9Y6U3 715 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 EDDM13A0A1B0GTR0 161 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 A0A1W2PQJ5 194 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 TARSL2A2RTX5 802 aaKnown RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 PRRT4C9JH25 899 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 KHNYNO15037 678 aaKnown RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 DNTTP04053 509 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 TUBB4AP04350 444 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 GZMAP12544 262 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 ATP1A3P13637 1013 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 GPD1P21695 349 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 HLA-FP30511 346 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 HOXC13P31276 330 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 PTPN9P43378 593 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 RECQLP46063 649 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 DHPSP49366 369 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 GTF2A1P52655 376 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 ATXN3P54252 364 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 GSCP56915 257 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 FANCCQ00597 558 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 FMO1Q01740 532 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 RPL6Q02878 288 aaKnown RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 CREB5Q02930 508 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 ZNF234Q14588 700 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 PUM1Q14671 1186 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP3-208ENST00000558285 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 PLK5Q496M5 336 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 EMC10Q5UCC4 262 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 LYSMD4Q5XG99 296 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 IL31Q6EBC2 164 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 SETD3Q86TU7 594 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 KBTBD6Q86V97 674 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 OR2T3Q8NH03 318 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 SKA1Q96BD8 255 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 NUSAP1Q9BXS6 441 aaKnown RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 TPSD1Q9BZJ3 242 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 TKTL2Q9H0I9 626 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 MUC3BQ9H195 1237 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 CBX8Q9HC52 389 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 AJAP1Q9UKB5 411 aaPredicted RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 HPCAL4Q9UM19 191 aa8.93□□□□□ -0.98
USP3-208ENST00000558285 LUC7L2Q9Y383 392 aaKnown RBP8.93□□□□□ -0.98
USP3-208ENST00000558285 ADAM23O75077 832 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 PAGE1O75459 146 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 RNF8O76064 485 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 GABRG2P18507 467 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 CD6P30203 668 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 CASQ1P31415 396 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 HTR7P34969 479 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 MPLP40238 635 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 P2RY2P41231 377 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 WASP42768 502 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 KLK7P49862 253 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 ZNF135P52742 658 aaPredicted RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 RPS24P62847 133 aaKnown RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 ECT2LQ008S8 904 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 DMWDQ09019 674 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 ENPP2Q13822 863 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 AUHQ13825 339 aaKnown RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 DSG2Q14126 1118 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 LPAL2Q16609 132 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 TDRD12Q587J7 1177 aaKnown RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 PITRM1Q5JRX3 1037 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 EFHC2Q5JST6 749 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 FAM46CQ5VWP2 391 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 PMS2CLQ68D20 193 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 ZNF776Q68DI1 518 aaPredicted RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 ACAD10Q6JQN1 1059 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 RETSATQ6NUM9 610 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 DPY19L2P1Q6NXN4 242 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms