RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PM20D1Q6GTS8 502 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 GLB1LQ6UWU2 654 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 RNF180Q86T96 592 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 RASSF3Q86WH2 238 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 PCSK9Q8NBP7 692 aaKnown RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 SPATA22Q8NHS9 363 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 ZNF669Q96BR6 464 aaPredicted RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 PRR11Q96HE9 360 aaPredicted RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 SUSD3Q96L08 255 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 LRRC37BQ96QE4 947 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 FERMT1Q9BQL6 677 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 MLPHQ9BV36 600 aaPredicted RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 OSER1Q9NX31 292 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 MOCS1Q9NZB8 636 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 MPP6Q9NZW5 540 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 HAO1Q9UJM8 370 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 USH1CQ9Y6N9 552 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 A0A1W2PQH9 124 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 TPP1O14773 563 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 PAGE1O75459 146 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 CYP11A1P05108 521 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 GSTA1P08263 222 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 DHRS4L1P0CG22 281 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 PPIDQ08752 370 aaKnown RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 PPM1JQ5JR12 505 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 FYB2Q5VWT5 728 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 NLRP9Q7RTR0 991 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 SCD5Q86SK9 330 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 MTDHQ86UE4 582 aaKnown RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 SMC1BQ8NDV3 1235 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 MFSD3Q96ES6 412 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 ZNF419Q96HQ0 510 aaPredicted RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 GLT1D1Q96MS3 346 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 AGAP2Q99490 1192 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 VPS11Q9H270 941 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 ZNF180Q9UJW8 692 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 BPTFQ12830 3046 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 ARHGAP42A6NI28 874 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TOMM70O94826 608 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 F9P00740 461 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 KRT16P08779 473 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PGAM1P18669 254 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 SETDB1Q15047 1291 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 CHI3L2Q15782 390 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TAF1BQ53T94 588 aaPredicted RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 LGSNQ5TDP6 509 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 DCLRE1AQ6PJP8 1040 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PACS1Q6VY07 963 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PARP9Q8IXQ6 854 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PGAP3Q96FM1 320 aaPredicted RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 FBXO6Q9NRD1 293 aaPredicted RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 ZFATQ9P243 1243 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 BAIAP2L1Q9UHR4 511 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PLLPQ9Y342 182 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 FAM237BA0A1B0GVD1 139 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 NT5C1B-RDH14C9J2C7 533 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 IRAK2O43187 625 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 MT-CYBP00156 380 aaPredicted RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 ALDOAP04075 364 aaKnown RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 MNAT1P51948 309 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 USP46P62068 366 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TMPRSS15P98073 1019 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 NIPAL4Q0D2K0 466 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PDZD4Q76G19 769 aaPredicted RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 CMC1Q7Z7K0 106 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 ATAD1Q8NBU5 361 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 RAET1EQ8TD07 263 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 ZNF778Q96MU6 729 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 CHRAC1Q9NRG0 131 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TBC1D13Q9NVG8 400 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TMEM51Q9NW97 253 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 IGSF9Q9P2J2 1179 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 VANGL2Q9ULK5 521 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 THSD7BQ9C0I4 1608 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM1-210ENST00000558264 TBX18O95935 607 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TROVE2P10155 538 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM1-210ENST00000558264 NQO1P15559 274 aaKnown RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 GALNT2Q10471 571 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 NOMO2Q5JPE7 1267 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TRAF7Q6Q0C0 670 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 C14orf80Q86SX3 495 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 CNTD1Q8N815 330 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 FCRL2Q96LA5 508 aaPredicted RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 C20orf27Q9GZN8 174 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 ATXN3LQ9H3M9 355 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 CAB39LQ9H9S4 337 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 EIF2B3Q9NR50 452 aaKnown RBP10.81□□□□□ -0.68
TPM1-210ENST00000558264 ZNF358Q9NW07 568 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 DSEQ9UL01 958 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 NEU3Q9UQ49 428 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 SLC27A5Q9Y2P5 690 aa10.81□□□□□ -0.68
TPM1-210ENST00000558264 TNFRSF10BO14763 440 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 AP2A1O95782 977 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 MLNP12872 115 aa10.8□□□□□ -0.68
TPM1-210ENST00000558264 CST5P28325 142 aaPredicted RBP10.8□□□□□ -0.68
TPM1-210ENST00000558264 RPL10AP62906 217 aaKnown RBP10.8□□□□□ -0.68
TPM1-210ENST00000558264 CDK16Q00536 496 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms