RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 KIAA1328Q86T90 577 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 PSTKQ8IV42 348 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 AHI1Q8N157 1196 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 TBC1D31Q96DN5 1066 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 EPAS1Q99814 870 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 SPATA6Q9NWH7 488 aaPredicted RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 A0A0A6YYK5 440 aaPredicted RBP26.3■■□□□ 1.8
SMAD6-202ENST00000557916 ARHGAP6O43182 974 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 MAN1A1P33908 653 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 EIF4HQ15056 248 aaKnown RBP26.3■■□□□ 1.8
SMAD6-202ENST00000557916 HADHQ16836 314 aaKnown RBP26.3■■□□□ 1.8
SMAD6-202ENST00000557916 KCNT1Q5JUK3 1230 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 TMEM215Q68D42 235 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 CXorf57Q6NSI4 855 aaKnown RBP26.3■■□□□ 1.8
SMAD6-202ENST00000557916 PKN3Q6P5Z2 889 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 TFAP2DQ7Z6R9 452 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 CPNE8Q86YQ8 564 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 SPEM1Q8N4L4 309 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 ZNF513Q8N8E2 541 aaPredicted RBP26.3■■□□□ 1.8
SMAD6-202ENST00000557916 CIPCQ9C0C6 399 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 ELOVL2Q9NXB9 296 aa26.3■■□□□ 1.8
SMAD6-202ENST00000557916 CHURC1-FNTBB4DL54 471 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 TIMM44O43615 452 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 ATG13O75143 517 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 HADHBP55084 474 aaKnown RBP26.29■■□□□ 1.8
SMAD6-202ENST00000557916 OXCT1P55809 520 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 SLC25A11Q02978 314 aaKnown RBP26.29■■□□□ 1.8
SMAD6-202ENST00000557916 SEMA3BQ13214 749 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 SMTNL2Q2TAL5 461 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 ADIPOR2Q86V24 386 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 KCNV2Q8TDN2 545 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 UCMAQ8WVF2 138 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 ZDHHC4Q9NPG8 344 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 HCN2Q9UL51 889 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 TBC1D30Q9Y2I9 924 aa26.29■■□□□ 1.8
SMAD6-202ENST00000557916 PJA2O43164 708 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 NRDCO43847 1150 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 RARAP10276 462 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 CHRM1P11229 460 aaPredicted RBP26.28■■□□□ 1.8
SMAD6-202ENST00000557916 RHOQP17081 205 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 SLC12A1Q13621 1099 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 FUT11Q495W5 492 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 EGFLAMQ63HQ2 1017 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 MBLAC2Q68D91 279 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 TXNRD3NBQ6F5E7 133 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 TXLNBQ8N3L3 684 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 ALLCQ8N6M5 410 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 HSPH1Q92598 858 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 KCTD15Q96SI1 283 aaPredicted RBP26.28■■□□□ 1.8
SMAD6-202ENST00000557916 LACRTQ9GZZ8 138 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 NEU3Q9UQ49 428 aa26.28■■□□□ 1.8
SMAD6-202ENST00000557916 MOCS3O95396 460 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 POLR2EP19388 210 aaKnown RBP26.27■■□□□ 1.8
SMAD6-202ENST00000557916 EPHB2P29323 1055 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 OR1E1P30953 314 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 CSKP41240 450 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 NUBP1P53384 320 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 DMC1Q14565 340 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 PPP6R3Q5H9R7 873 aaPredicted RBP26.27■■□□□ 1.8
SMAD6-202ENST00000557916 MAMSTRQ6ZN01 415 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 SETD3Q86TU7 594 aaPredicted RBP26.27■■□□□ 1.8
SMAD6-202ENST00000557916 C1orf210Q8IVY1 113 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 CCDC33Q8N5R6 958 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 IL17RCQ8NAC3 791 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 TEKT4Q8WW24 435 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 ACDQ96AP0 544 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 RETREG1Q9H6L5 497 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 ZNF212Q9UDV6 495 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 INTS6Q9UL03 887 aaKnown RBP26.27■■□□□ 1.8
SMAD6-202ENST00000557916 DUSP10Q9Y6W6 482 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 KMT2EQ8IZD2 1858 aa26.27■■□□□ 1.8
SMAD6-202ENST00000557916 BTNL10A8MVZ5 291 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 KLF8O95600 359 aaPredicted RBP26.26■■□□□ 1.79
SMAD6-202ENST00000557916 RHOCP08134 193 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 MZF1P28698 734 aaPredicted RBP26.26■■□□□ 1.79
SMAD6-202ENST00000557916 HTR7P34969 479 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 TAS2R40P59535 323 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 TPI1P60174 286 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 CCZ1BP86790 482 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 CCZ1P86791 482 aaPredicted RBP26.26■■□□□ 1.79
SMAD6-202ENST00000557916 PLEKHG6Q3KR16 790 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 HSF5Q4G112 596 aaPredicted RBP26.26■■□□□ 1.79
SMAD6-202ENST00000557916 PITRM1Q5JRX3 1037 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 C6orf118Q5T5N4 469 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 TRMT11Q7Z4G4 463 aaKnown RBP26.26■■□□□ 1.79
SMAD6-202ENST00000557916 NLRP14Q86W24 1093 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 APCDD1Q8J025 514 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 OR52K2Q8NGK3 314 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 SORCS1Q8WY21 1168 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 PDLIM2Q96JY6 352 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 PPP1R9BQ96SB3 815 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.26■■□□□ 1.79
SMAD6-202ENST00000557916 ATG2BQ96BY7 2078 aa26.26■■□□□ 1.79
SMAD6-202ENST00000557916 EEF2KO00418 725 aaKnown RBP26.25■■□□□ 1.79
SMAD6-202ENST00000557916 LAMTOR5O43504 91 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 ATP5BP06576 529 aaKnown RBP26.25■■□□□ 1.79
SMAD6-202ENST00000557916 HNRNPLP14866 589 aaKnown RBP eCLIP26.25■■□□□ 1.79
SMAD6-202ENST00000557916 HOXC13P31276 330 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 GJC1P36383 396 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 CXCL12P48061 93 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms