RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 IL1R2P27930 398 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 MZF1P28698 734 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 PCK1P35558 622 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 GJC1P36383 396 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 CXCL12P48061 93 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 NRG1Q02297 640 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 CSTF1Q05048 431 aaKnown RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 MESDQ14696 234 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 ANGPT1Q15389 498 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 SMTNL2Q2TAL5 461 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 KCNT1Q5JUK3 1230 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 ACBD5Q5T8D3 534 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 MANEALQ5VSG8 457 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 MBLAC2Q68D91 279 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 CXorf57Q6NSI4 855 aaKnown RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 CYP4V2Q6ZWL3 525 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 ADIPOR2Q86V24 386 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 CHPFQ8IZ52 775 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 MAML2Q8IZL2 1156 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 AHI1Q8N157 1196 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 NIPA2Q8N8Q9 360 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 ZNF557Q8N988 423 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 IL17RCQ8NAC3 791 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 OR52K2Q8NGK3 314 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 ACDQ96AP0 544 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 TBC1D31Q96DN5 1066 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 KCTD15Q96SI1 283 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 EPAS1Q99814 870 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 DESI2Q9BSY9 194 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 IER2Q9BTL4 223 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 ZYG11BQ9C0D3 744 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 KIAA1522Q9P206 1035 aaPredicted RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 INTS6Q9UL03 887 aaKnown RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
USP3-205ENST00000557884 STARD13Q9Y3M8 1113 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 RCCD1A6NED2 376 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 CHURC1-FNTBB4DL54 471 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 SGK1O00141 431 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 ADAM23O75077 832 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 POLR2EP19388 210 aaKnown RBP14.75□□□□□ -0.05
USP3-205ENST00000557884 L1CAMP32004 1257 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 NOP2P46087 812 aaKnown RBP14.75□□□□□ -0.05
USP3-205ENST00000557884 MRE11P49959 708 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 CCR3P51677 355 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 AIF1P55008 147 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 DMC1Q14565 340 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 ACAP1Q15027 740 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
USP3-205ENST00000557884 PITRM1Q5JRX3 1037 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 ERMARDQ5T6L9 678 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 RNF219Q5W0B1 726 aaPredicted RBP14.75□□□□□ -0.05
USP3-205ENST00000557884 TXNRD3NBQ6F5E7 133 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 KIAA0907Q7Z7F0 614 aaPredicted RBP14.75□□□□□ -0.05
USP3-205ENST00000557884 RHOT2Q8IXI1 618 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 APCDD1Q8J025 514 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 UCMAQ8WVF2 138 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 HSPH1Q92598 858 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 HHIPQ96QV1 700 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 NCAPGQ9BPX3 1015 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 MUC3BQ9H195 1237 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
USP3-205ENST00000557884 MMP17Q9ULZ9 603 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 SLC8A2Q9UPR5 921 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 NEU3Q9UQ49 428 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 HCN4Q9Y3Q4 1203 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 DMDP11532 3685 aa14.75□□□□□ -0.05
USP3-205ENST00000557884 WASH3PC4AMC7 463 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 H0Y858 1186 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 TIMM44O43615 452 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 MTA2O94776 668 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 RHOCP08134 193 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 EPHB2P29323 1055 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 OR1E1P30953 314 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 NTSR1P30989 418 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 CTSOP43234 321 aaPredicted RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 PXNP49023 591 aaPredicted RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 NUBP1P53384 320 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 SLC25A11Q02978 314 aaKnown RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 SEMA3BQ13214 749 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 PLEKHG6Q3KR16 790 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 FNDC3BQ53EP0 1204 aaKnown RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 PPP6R3Q5H9R7 873 aaPredicted RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 SYT13Q7L8C5 426 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 TRMT11Q7Z4G4 463 aaKnown RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 KIAA1328Q86T90 577 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 KCNV2Q8TDN2 545 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 PRMT8Q9NR22 394 aaPredicted RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 THAP10Q9P2Z0 257 aaPredicted RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 PPARGC1AQ9UBK2 798 aaKnown RBP14.74□□□□□ -0.05
USP3-205ENST00000557884 ZNF212Q9UDV6 495 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 TBC1D30Q9Y2I9 924 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 RAD54BQ9Y620 910 aa14.74□□□□□ -0.05
USP3-205ENST00000557884 ZNF318Q5VUA4 2279 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 K7ESF4 209 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 MOCS3O95396 460 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 ATP5BP06576 529 aaKnown RBP14.73□□□□□ -0.05
USP3-205ENST00000557884 DLDP09622 509 aaKnown RBP14.73□□□□□ -0.05
USP3-205ENST00000557884 RARAP10276 462 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 HLA-EP13747 358 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 HOXB2P14652 356 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms