RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 DENND5BQ6ZUT9 1274 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 CATSPER4Q7RTX7 472 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 SLC46A3Q7Z3Q1 461 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 CLNKQ7Z7G1 428 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 GALNT7Q86SF2 657 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 LINC00346Q8IVM7 164 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ARHGAP12Q8IWW6 846 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.03□□□□□ -1.76
TDP1-217ENST00000557782 METTL25Q8N6Q8 603 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ARL6IP6Q8N6S5 226 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 NAT8LQ8N9F0 302 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 CADM4Q8NFZ8 388 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 MOSPD2Q8NHP6 518 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 RAB40AQ8WXH6 277 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 KCNJ9Q92806 393 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 SECISBP2LQ93073 1101 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 LRIG1Q96JA1 1093 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 ABHD1Q96SE0 405 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 DPCDQ9BVM2 203 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 NPLQ9BXD5 320 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 SLC32A1Q9H598 525 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 MSL2Q9HCI7 577 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 FBRSL1Q9HCM7 1045 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 RRP7BPQ9NSQ0 103 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 SPATS2LQ9NUQ6 558 aaKnown RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 IL1RAPL1Q9NZN1 696 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 C5AR2Q9P296 337 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 EPS15L1Q9UBC2 864 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 MBD1Q9UIS9 605 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.03□□□□□ -1.76
TDP1-217ENST00000557782 ADAM18Q9Y3Q7 739 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 PCDHB2Q9Y5E7 798 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 TRPV2Q9Y5S1 764 aa4.03□□□□□ -1.76
TDP1-217ENST00000557782 LRRC53A6NM62 1247 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 RTCAO00442 366 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 FFAR3O14843 346 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 LDLRAD4O15165 306 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 GPR42O15529 346 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 PEX10O60683 326 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 MFAP3LO75121 409 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 SUN1O94901 812 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 OR2C1O95371 312 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 GLI1P08151 1106 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 CYP4B1P13584 511 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 KIF5BP33176 963 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 STAT2P52630 851 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 MVDP53602 400 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 MC2RQ01718 297 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 NIPAL4Q0D2K0 466 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 AP1B1Q10567 949 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 TUBB3Q13509 450 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 ALKBH1Q13686 389 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 BYSLQ13895 437 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 SLMAPQ14BN4 828 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 PCLAFQ15004 111 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 GPR162Q16538 588 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 FAM187BQ17R55 369 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 RSPO4Q2I0M5 234 aaPredicted RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 RNF151Q2KHN1 245 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 ZNF674Q2M3X9 581 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 C15orf59Q2T9L4 293 aaPredicted RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 KRTCAP3Q53RY4 240 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 ZNF805Q5CZA5 627 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 KRBOX4Q5JUW0 171 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 METTL24Q5JXM2 366 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 CCDC158Q5M9N0 1113 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 NKAPLQ5M9Q1 402 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 RBM20Q5T481 1227 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 GKAP1Q5VSY0 366 aaPredicted RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 FAM171A1Q5VUB5 890 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 TMEM132EQ6IEE7 984 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 MTFR2Q6P444 385 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 TMEM88Q6PEY1 159 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 IYDQ6PHW0 289 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 CNSTQ6PJW8 725 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 SLC2A7Q6PXP3 512 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 C16orf89Q6UX73 402 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 KIAA1324Q6UXG2 1013 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 USP51Q70EK9 711 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 GSTA5Q7RTV2 222 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 RHPN2Q8IUC4 686 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 BRSK2Q8IWQ3 736 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.02□□□□□ -1.77
TDP1-217ENST00000557782 TRIML1Q8N9V2 468 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 C11orf65Q8NCR3 313 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 SUPT20HQ8NEM7 779 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 Q8NFD4 153 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 SETD6Q8TBK2 473 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 CLEC4CQ8WTT0 213 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 SNX19Q92543 992 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 OSBPL9Q96SU4 736 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 MYCBPQ99417 103 aaPredicted RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 SPATA25Q9BR10 227 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 STRA6Q9BX79 667 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 C12orf65Q9H3J6 166 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 OPA3Q9H6K4 179 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 LTB4R2Q9NPC1 389 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 ADPRHL2Q9NX46 363 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 RNF181Q9P0P0 153 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms