RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ZNF75DP51815 510 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 AFF3P51826 1226 aaKnown RBP17.25■□□□□ 0.35
NEK9-211ENST00000557673 FMO1Q01740 532 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 ZNF234Q14588 700 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 ASIC2Q16515 512 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 HLA-BQ31612 363 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 SERPINA13PQ6UXR4 307 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 SCML4Q8N228 414 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 CPXM2Q8N436 756 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 DDI1Q8WTU0 396 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 RNF139Q8WU17 664 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 OLA1Q9NTK5 396 aaKnown RBP17.25■□□□□ 0.35
NEK9-211ENST00000557673 SFMBT1Q9UHJ3 866 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 CAPN11Q9UMQ6 739 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.25■□□□□ 0.35
NEK9-211ENST00000557673 NBEAQ8NFP9 2946 aa17.25■□□□□ 0.35
NEK9-211ENST00000557673 MSI1O43347 362 aaKnown RBP17.24■□□□□ 0.35
NEK9-211ENST00000557673 CCDC172P0C7W6 258 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 CHRNB2P17787 502 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 PRKCIP41743 596 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 NOMO3P69849 1222 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 ZBED6P86452 979 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 TEAD4Q15561 434 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 SFMBT2Q5VUG0 894 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 IRF2BP2Q7Z5L9 587 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 SLCO6A1Q86UG4 719 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 WDTC1Q8N5D0 677 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 MRFAP1L1Q96HT8 127 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 CPXM1Q96SM3 734 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 SYT11Q9BT88 431 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 SLC4A5Q9BY07 1137 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 MIS12Q9H081 205 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 ABCC13Q9NSE7 274 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 AIPL1Q9NZN9 384 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 EIF2B4Q9UI10 523 aaKnown RBP17.24■□□□□ 0.35
NEK9-211ENST00000557673 PLA2G4CQ9UP65 541 aa17.24■□□□□ 0.35
NEK9-211ENST00000557673 ITPR1Q14643 2758 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 E5RJQ4 531 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 CASP14P31944 242 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 ACADSBP45954 432 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 HARS2P49590 506 aaKnown RBP17.23■□□□□ 0.35
NEK9-211ENST00000557673 COPAP53621 1224 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 PTPN20Q4JDL3 420 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 TRIM72Q6ZMU5 477 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 DBX2Q6ZNG2 339 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 TMPRSS7Q7RTY8 843 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 GALNT15Q8N3T1 639 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 TMEM35BQ8NCS4 154 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 OR2T3Q8NH03 318 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 RHBDD1Q8TEB9 315 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 IRGQQ8WZA9 623 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 NOX5Q96PH1 765 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 NUCKS1Q9H1E3 243 aaKnown RBP17.23■□□□□ 0.35
NEK9-211ENST00000557673 PDCL3Q9H2J4 239 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 FBRSQ9HAH7 460 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 IL21RQ9HBE5 538 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 ST7Q9NRC1 585 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 TJP2Q9UDY2 1190 aa17.23■□□□□ 0.35
NEK9-211ENST00000557673 FNDC3AQ9Y2H6 1198 aaKnown RBP17.23■□□□□ 0.35
NEK9-211ENST00000557673 HBS1LQ9Y450 684 aaKnown RBP17.23■□□□□ 0.35
NEK9-211ENST00000557673 LAMA5O15230 3695 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 FBXO21O94952 628 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 LTFP02788 710 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 CYP1A1P04798 512 aaPredicted RBP17.22■□□□□ 0.35
NEK9-211ENST00000557673 TRIP4Q15650 581 aaPredicted RBP17.22■□□□□ 0.35
NEK9-211ENST00000557673 MPPE1Q53F39 396 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 NAA35Q5VZE5 725 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 MSANTD2Q6P1R3 559 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 C19orf48Q6RUI8 117 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 TMC6Q7Z403 805 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 TMEM110Q86TL2 294 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 PDZD3Q86UT5 571 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 FAM217AQ8IXS0 508 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 ZNF397Q8NF99 534 aaPredicted RBP17.22■□□□□ 0.35
NEK9-211ENST00000557673 C1orf216Q8TAB5 229 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 SNX19Q92543 992 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 SYN2Q92777 582 aaPredicted RBP17.22■□□□□ 0.35
NEK9-211ENST00000557673 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 DKK4Q9UBT3 224 aa17.22■□□□□ 0.35
NEK9-211ENST00000557673 LUC7L2Q9Y383 392 aaKnown RBP17.22■□□□□ 0.35
NEK9-211ENST00000557673 ACACAQ13085 2346 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 A0A1B0GVT2 93 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 PAPSS1O43252 624 aaPredicted RBP17.21■□□□□ 0.35
NEK9-211ENST00000557673 MFAP3LO75121 409 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 PRKCHP24723 683 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 CSNK1EP49674 416 aaKnown RBP17.21■□□□□ 0.35
NEK9-211ENST00000557673 ZBTB16Q05516 673 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
NEK9-211ENST00000557673 CAMK2GQ13555 558 aaPredicted RBP17.21■□□□□ 0.35
NEK9-211ENST00000557673 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 FAM124AQ86V42 546 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 SCUBE3Q8IX30 993 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 BAHD1Q8TBE0 780 aaPredicted RBP17.21■□□□□ 0.35
NEK9-211ENST00000557673 WFIKKN2Q8TEU8 576 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 GOLGA1Q92805 767 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 PPP1R13BQ96KQ4 1090 aa17.21■□□□□ 0.35
NEK9-211ENST00000557673 PCDHB18PQ96TA0 734 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms