RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 RALGPS2Q86X27 583 aaPredicted RBP15.72■□□□□ 0.11
NEDD1-213ENST00000557644 NETO2Q8NC67 525 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 HES6Q96HZ4 224 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 C8orf33Q9H7E9 229 aaPredicted RBP15.72■□□□□ 0.11
NEDD1-213ENST00000557644 ETNK2Q9NVF9 386 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 ZKSCAN5Q9Y2L8 839 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 CCDC66A2RUB6 948 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 ANTXRLA6NF34 631 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 DAPK3O43293 454 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 CLDN11O75508 207 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 CISD3P0C7P0 127 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 AMPD1P23109 780 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 CTNNA2P26232 953 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 OR1E1P30953 314 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 CD70P32970 193 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 MEI1Q5TIA1 1274 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 MFSD7Q6UXD7 560 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 KATNAL2Q8IYT4 538 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 PHTF2Q8N3S3 785 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 ARHGEF4Q9NR80 690 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 KCND1Q9NSA2 647 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 ABCB8Q9NUT2 735 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 DDX56Q9NY93 547 aaKnown RBP15.72■□□□□ 0.11
NEDD1-213ENST00000557644 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
NEDD1-213ENST00000557644 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.72■□□□□ 0.11
NEDD1-213ENST00000557644 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.71■□□□□ 0.11
NEDD1-213ENST00000557644 GOLGA6L9A6NEM1 432 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 H3BRJ5 948 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 ENC1O14682 589 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 DCXO43602 365 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 KIF5CO60282 957 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 SLC34A2O95436 690 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 RHOQP17081 205 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 ERCC2P18074 760 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 DGKGP49619 791 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 LMAN2Q12907 356 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 ZNF177Q13360 481 aaPredicted RBP15.71■□□□□ 0.11
NEDD1-213ENST00000557644 PDK2Q15119 407 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 AADACL2Q6P093 401 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 CHST9Q7L1S5 443 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 SLC35F6Q8N357 371 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 PCDH19Q8TAB3 1148 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 FIBINQ8TAL6 211 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 P2RY13Q9BPV8 354 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 TMEM248Q9NWD8 314 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 GLULP15104 373 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 HCAR3P49019 387 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 GEN1Q17RS7 908 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 ODF2Q5BJF6 829 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 ANKRD20A8PQ5CZ79 823 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 DCAF12L1Q5VU92 463 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 MAP7D3Q8IWC1 876 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 RTL3Q8N8U3 475 aaKnown RBP15.71■□□□□ 0.11
NEDD1-213ENST00000557644 FAM3CQ92520 227 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 EDAQ92838 391 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 LMLNQ96KR4 655 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 PSMB7Q99436 277 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 ZNF670Q9BS34 389 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 TBC1D30Q9Y2I9 924 aa15.71■□□□□ 0.11
NEDD1-213ENST00000557644 DOCK4Q8N1I0 1966 aa15.71■□□□□ 0.1
NEDD1-213ENST00000557644 A0A0D9SEW6 157 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 ZRANB2O95218 330 aaKnown RBP eCLIP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 MZF1P28698 734 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 AMPD2Q01433 879 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 ZNF211Q13398 564 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 NPWQ8N729 165 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 EZH1Q92800 747 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 PNKPQ96T60 521 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 TLR10Q9BXR5 811 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 CATSPERBQ9H7T0 1116 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 NDRG2Q9UN36 371 aaKnown RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 MIF4GDA9UHW6 222 aaKnown RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 FGF10O15520 208 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 PYGMP11217 842 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 KRT10P13645 584 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 HTR7P34969 479 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 EIF2DP41214 584 aaKnown RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 CSKP41240 450 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 CDKN2BP42772 138 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 RWDD2BP57060 319 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 TMEM215Q68D42 235 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 GRAMD4Q6IC98 578 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 CCDC50Q8IVM0 306 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 TP53INP2Q8IXH6 220 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 PQLC3Q8N755 202 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 UBL4BQ8N7F7 174 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 EXD1Q8NHP7 514 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 FAF2Q96CS3 445 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 SLC2A11Q9BYW1 496 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 NOL6Q9H6R4 1146 aaKnown RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 RCOR3Q9P2K3 495 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 GGA2Q9UJY4 613 aa15.7■□□□□ 0.1
NEDD1-213ENST00000557644 INTS6Q9UL03 887 aaKnown RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 MTF2Q9Y483 593 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-213ENST00000557644 PRRT4C9JH25 899 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 DCLK1O15075 740 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 KAT7O95251 611 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 ZNF135P52742 658 aaPredicted RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 GNG11P61952 73 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms