RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 CEP192Q8TEP8 1941 aa12.9□□□□□ -0.35
SLIRP-211ENST00000557623 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 SMAPO00193 183 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 DDX3XO00571 662 aaKnown RBP eCLIP12.89□□□□□ -0.353e-31■■■■■ 27.5
SLIRP-211ENST00000557623 MYBL1P10243 752 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 RRM1P23921 792 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 CD70P32970 193 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 WASP42768 502 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 LMAN2Q12907 356 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ENPP2Q13822 863 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 BYSLQ13895 437 aaKnown RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 SIM2Q14190 667 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF234Q14588 700 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 STARD3Q14849 445 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 C15orf59Q2T9L4 293 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 C5orf22Q49AR2 442 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 MBLAC2Q68D91 279 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ANO7Q6IWH7 933 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 SARM1Q6SZW1 724 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 CEP68Q76N32 757 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ADIPOR2Q86V24 386 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ALYREFQ86V81 257 aaKnown RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 C11orf74Q86VG3 221 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 VSTM4Q8IW00 320 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 WFDC5Q8TCV5 224 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 GAB3Q8WWW8 586 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 CENPIQ92674 756 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 MCEEQ96PE7 176 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ACOX2Q99424 681 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 CACNA2D2Q9NY47 1150 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 BCCIPQ9P287 314 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 RALGAPA1Q6GYQ0 2036 aa12.89□□□□□ -0.35
SLIRP-211ENST00000557623 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 CLDN11O75508 207 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 RPP40O75818 363 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 GJB6O95452 261 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ASLP04424 464 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 DLDP09622 509 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 HNRNPH3P31942 346 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 IL12RB1P42701 662 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF143P52747 638 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 CDH4P55283 916 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 FNDC3BQ53EP0 1204 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 USP39Q53GS9 565 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ASCL5Q7RTU5 278 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 FAM131BQ86XD5 332 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 CCAR2Q8N163 923 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 SUMF1Q8NBK3 374 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 IGSF8Q969P0 613 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 LMLNQ96KR4 655 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 CNPY3Q9BT09 278 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 TRIM5Q9C035 493 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 MRPL47Q9HD33 250 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 CNOT8Q9UFF9 292 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 ADAMTS1Q9UHI8 967 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 SMG5Q9UPR3 1016 aaKnown RBP12.88□□□□□ -0.35
SLIRP-211ENST00000557623 SCINQ9Y6U3 715 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 THADAQ6YHU6 1953 aa12.88□□□□□ -0.35
SLIRP-211ENST00000557623 A0A1W2PQF6 199 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 E9PAM4 449 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 HOXC13P31276 330 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 ADRA1BP35368 520 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 PLK1P53350 603 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
SLIRP-211ENST00000557623 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 FUT11Q495W5 492 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 PITRM1Q5JRX3 1037 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 CYB5D2Q8WUJ1 264 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 HMGB4Q8WW32 186 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 SORCS1Q8WY21 1168 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 NTAN1Q96AB6 310 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 SPACA7Q96KW9 195 aa12.87□□□□□ -0.35
SLIRP-211ENST00000557623 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms