RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SLC8A1P32418 973 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ELF1P32519 619 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 STAT6P42226 847 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 GDF5P43026 501 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 GABRB2P47870 512 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 RPS6KA3P51812 740 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TUBA4AP68366 448 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 RAE1P78406 368 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 FOXF2Q12947 444 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 MAPK7Q13164 816 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 SIM2Q14190 667 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 FAM153CQ494X1 144 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 LRRC24Q50LG9 513 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CCDC184Q52MB2 194 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF766Q5HY98 468 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF484Q5JVG2 852 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 FCRLBQ6BAA4 426 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 MDGA2Q7Z553 956 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 SCN4BQ8IWT1 228 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ADGRF3Q8IZF5 1079 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 HASPINQ8TF76 798 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 XAGE5Q8WWM1 108 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 C3orf49Q96BT1 292 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TEFMQ96QE5 360 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 AGAP2Q99490 1192 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CIPCQ9C0C6 399 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PDE11AQ9HCR9 933 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PREBQ9HCU5 417 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ZCCHC6Q5VYS8 1495 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 EMSYQ7Z589 1322 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CCDC180Q9P1Z9 1646 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3DA0A087WVF3 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3IA0A087WXS9 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3EA0A087X179 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3KA0A087X1G2 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3BA6NDS4 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3FA6NER0 549 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 NPIPB13A6NJU9 1138 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 NPIPB5A8MRT5 1133 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3LB9A6J9 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 NPIPB4C9JG80 1138 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 UBE2Q2LH0YL09 131 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TLX3O43711 291 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 RAMP2O60895 175 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 HNRNPCP07910 306 aaKnown RBP eCLIP1.9□□□□□ -2.114e-7■■■■□ 21.1
HIF1A-212ENST00000557538 TBC1D3HP0C7X1 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 INSRRP14616 1297 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CERS1P27544 350 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 NDUFS1P28331 727 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 BLKP51451 505 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 FOXD4Q12950 439 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 DDX10Q13206 875 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 GAB1Q13480 694 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TAF12Q16514 161 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 BTBD16Q32M84 506 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 L1TD1Q5T7N2 865 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PAPD7Q5XG87 772 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3GQ6DHY5 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TTLL5Q6EMB2 1281 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 NCAPH2Q6IBW4 605 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3CQ6IPX1 549 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PLEKHA7Q6IQ23 1121 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 RBM44Q6ZP01 1051 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 KRT27Q7Z3Y8 459 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 GGNQ86UU5 652 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D3Q8IZP1 549 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 GALNT16Q8N428 558 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 BICD2Q8TD16 824 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CELF1Q92879 486 aaKnown RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ARRDC3Q96B67 414 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 COQ8BQ96D53 544 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 MCRS1Q96EZ8 462 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PRR11Q96HE9 360 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CD180Q99467 661 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 SLX1AQ9BQ83 275 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 CLSTN3Q9BQT9 956 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF341Q9BYN7 854 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 ARHGAP39Q9C0H5 1083 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 TAF1DQ9H5J8 278 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 PLEKHA2Q9HB19 425 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 BEX4Q9NWD9 120 aaPredicted RBP1.9□□□□□ -2.11
HIF1A-212ENST00000557538 RRN3Q9NYV6 651 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 GGA3Q9NZ52 723 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 B3GNT3Q9Y2A9 372 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 RPGRIP1LQ68CZ1 1315 aa1.9□□□□□ -2.11
HIF1A-212ENST00000557538 KIF28PB7ZC32 967 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 TMEM232C9JQI7 657 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 M0QYT0 321 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 KIF1CO43896 1103 aaKnown RBP1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CNTN5O94779 1100 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 BAIAP3O94812 1187 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 IGLV2-14P01704 120 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CSF1P09603 554 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 MYZAPP0CAP1 466 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 SCP2P22307 547 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 AVPR2P30518 371 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 CXCR5P32302 372 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 LIFRP42702 1097 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 AGTR2P50052 363 aa1.89□□□□□ -2.11
HIF1A-212ENST00000557538 RASSF2P50749 326 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms