RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CTTNBP2NLQ9P2B4 639 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 IMPACTQ9P2X3 320 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 UVRAGQ9P2Y5 699 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 THAP10Q9P2Z0 257 aaPredicted RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 OR12D3Q9UGF7 316 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 IP6K2Q9UHH9 426 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 ANAPC7Q9UJX3 599 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 PRPSAP2O60256 369 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ADAM23O75077 832 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 CNTN5O94779 1100 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 APBB3O95704 486 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ATP5BP06576 529 aaKnown RBP13.99□□□□□ -0.17
SHMT2-228ENST00000557302 HOXB2P14652 356 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 HOXA6P31267 233 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 WASP42768 502 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 DGKEP52429 567 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 SLC12A1Q13621 1099 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 PIGHQ14442 188 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ACAP1Q15027 740 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 CRY1Q16526 586 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ALFQ53S48 1182 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 PITRM1Q5JRX3 1037 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 CXorf57Q6NSI4 855 aaKnown RBP13.99□□□□□ -0.17
SHMT2-228ENST00000557302 TFAP2DQ7Z6R9 452 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 CCDC170Q8IYT3 715 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 CAMKK1Q8N5S9 505 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ARFGAP1Q8N6T3 406 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 SORCS1Q8WY21 1168 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 TTC17Q96AE7 1141 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 HHIPQ96QV1 700 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 PPP1R9BQ96SB3 815 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ZYG11BQ9C0D3 744 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 POLMQ9NP87 494 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-228ENST00000557302 ZSCAN32Q9NX65 697 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 CACNA2D2Q9NY47 1150 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 MPP6Q9NZW5 540 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 PPARGC1AQ9UBK2 798 aaKnown RBP13.99□□□□□ -0.17
SHMT2-228ENST00000557302 FZD10Q9ULW2 581 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 PLA2G4CQ9UP65 541 aa13.99□□□□□ -0.17
SHMT2-228ENST00000557302 FAM72CH0Y354 149 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 MYO1FO00160 1098 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 LRCH4O75427 683 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 ALDH1A2O94788 518 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 LRIG2O94898 1065 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 ASLP04424 464 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 RHOCP08134 193 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 DLDP09622 509 aaKnown RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 MIPP30301 263 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 L1CAMP32004 1257 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 PCK1P35558 622 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 CYLC1P35663 651 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 CSKP41240 450 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 NHLH1Q02575 133 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF234Q14588 700 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 STARD3Q14849 445 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 PLEKHG6Q3KR16 790 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 FNDC3BQ53EP0 1204 aaKnown RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 C6orf118Q5T5N4 469 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 FAM72AQ5TYM5 149 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 MANEALQ5VSG8 457 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 HEATR6Q6AI08 1181 aaKnown RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 FAM72DQ6L9T8 149 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 ZC3H14Q6PJT7 736 aaKnown RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 SERPINA13PQ6UXR4 307 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 TMEM92Q6UXU6 159 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 FAM72BQ86X60 149 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 TMTC1Q8IUR5 882 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 CYB5D2Q8WUJ1 264 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 NELL1Q92832 810 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 TBC1D31Q96DN5 1066 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 BTBD6Q96KE9 485 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 EPAS1Q99814 870 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 GABRG3Q99928 467 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 MAGEB5Q9BZ81 275 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 PCSK1NQ9UHG2 260 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 INTS6Q9UL03 887 aaKnown RBP13.98□□□□□ -0.17
SHMT2-228ENST00000557302 TBC1D30Q9Y2I9 924 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 PCDHGA2Q9Y5H1 932 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 STON1Q9Y6Q2 735 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 MYO15AQ9UKN7 3530 aa13.98□□□□□ -0.17
SHMT2-228ENST00000557302 MYO18AQ92614 2054 aaKnown RBP13.97□□□□□ -0.17
SHMT2-228ENST00000557302 EIF3CLB5ME19 914 aaKnown RBP13.97□□□□□ -0.17
SHMT2-228ENST00000557302 FECHP22830 423 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 MZF1P28698 734 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-228ENST00000557302 HOXC13P31276 330 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 IL12RB1P42701 662 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 PXNP49023 591 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-228ENST00000557302 FNTBP49356 437 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 DMWDQ09019 674 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 ENPP2Q13822 863 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 SPA17Q15506 151 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 PTPRNQ16849 979 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 ARTNQ5T4W7 220 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 ERMARDQ5T6L9 678 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 SETD3Q86TU7 594 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-228ENST00000557302 LONP2Q86WA8 852 aa13.97□□□□□ -0.17
SHMT2-228ENST00000557302 PYROXD2Q8N2H3 581 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms