RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SLC45A4Q5BKX6 768 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 FSCBQ5H9T9 825 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 PITRM1Q5JRX3 1037 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 NADSYN1Q6IA69 706 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 GPR155Q7Z3F1 870 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 CCDC117Q8IWD4 279 aaPredicted RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 SCML4Q8N228 414 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 GUF1Q8N442 669 aaKnown RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 ZNF843Q8N446 348 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 HJURPQ8NCD3 748 aaPredicted RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 CCDC47Q96A33 483 aaKnown RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 AZIN2Q96A70 460 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 SLCO3A1Q9UIG8 710 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 PTPRQQ9UMZ3 2332 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3DA0A087WVF3 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3IA0A087WXS9 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3EA0A087X179 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3KA0A087X1G2 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 EDDM13A0A1B0GTR0 161 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TEX51A0A1B0GUA7 166 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TYW5A2RUC4 315 aaKnown RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3FA6NER0 549 aaPredicted RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3LB9A6J9 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CAPN9O14815 690 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 ADH1BP00325 375 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 SRPRAP08240 638 aaKnown RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3HP0C7X1 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 VDRP11473 427 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 C5AR1P21730 350 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CMA1P23946 247 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 ACTN2P35609 894 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 ADPRHP54922 357 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TLE3Q04726 772 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CDH18Q13634 790 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CBWD6Q4V339 395 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 ZCWPW2Q504Y3 356 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CBWD3Q5JTY5 395 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CBWD5Q5RIA9 395 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3GQ6DHY5 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3CQ6IPX1 549 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 PMF1Q6P1K2 205 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 SND1Q7KZF4 910 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNX6-209ENST00000557265 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 TBC1D3Q8IZP1 549 aaPredicted RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 CFAP52Q8N1V2 620 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 STK40Q8N2I9 435 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 OXR1Q8N573 874 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 IRGQQ8WZA9 623 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 DDX50Q9BQ39 737 aaKnown RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 ERVMER34-1Q9H9K5 563 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 KIAA1257Q9ULG3 409 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
SNX6-209ENST00000557265 CLCA2Q9UQC9 943 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 HPSEQ9Y251 543 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
SNX6-209ENST00000557265 MOCS3O95396 460 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 IL1BP01584 269 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 LTFP02788 710 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 YWHAEP62258 255 aaKnown RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 PPP2CBP62714 309 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 PPP2CAP67775 309 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 CXADRP78310 365 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 ECT2LQ008S8 904 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 INSM1Q01101 510 aaPredicted RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 DPYDQ12882 1025 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 LRMPQ12912 555 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 DCAF6Q58WW2 860 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 MS4A13Q5J8X5 152 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 RNF219Q5W0B1 726 aaPredicted RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 NAPEPLDQ6IQ20 393 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 PCSK4Q6UW60 755 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 LCLAT1Q6UWP7 414 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 KANSL1Q7Z3B3 1105 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 SPACA3Q8IXA5 215 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 APCDD1Q8J025 514 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 CACTIN-AS1Q8N1I8 211 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 DCBLD1Q8N8Z6 715 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 MFSD2AQ8NA29 543 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 CLEC4CQ8WTT0 213 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 SLC35F5Q8WV83 523 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 RFFLQ8WZ73 363 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 TFAP2BQ92481 460 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 PTPRN2Q92932 1015 aa12.73□□□□□ -0.37
SNX6-209ENST00000557265 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 NUCKS1Q9H1E3 243 aaKnown RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 MUC22E2RYF6 1773 aaPredicted RBP12.73□□□□□ -0.37
SNX6-209ENST00000557265 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
SNX6-209ENST00000557265 ITIH6Q6UXX5 1313 aa12.72□□□□□ -0.37
SNX6-209ENST00000557265 TRIM38O00635 465 aa12.72□□□□□ -0.37
SNX6-209ENST00000557265 CETN3O15182 167 aa12.72□□□□□ -0.37
SNX6-209ENST00000557265 LATO43561 262 aa12.72□□□□□ -0.37
SNX6-209ENST00000557265 SDC3O75056 442 aa12.72□□□□□ -0.37
SNX6-209ENST00000557265 LUC7L3O95232 432 aaKnown RBP12.72□□□□□ -0.37
SNX6-209ENST00000557265 EPB41P11171 864 aaKnown RBP12.72□□□□□ -0.37
SNX6-209ENST00000557265 MZF1P28698 734 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms