RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RHBDD1Q8TEB9 315 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 ZCCHC14Q8WYQ9 949 aaKnown RBP16.43■□□□□ 0.22
TUBB3-213ENST00000557262 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 SNX11Q9Y5W9 270 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
TUBB3-213ENST00000557262 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
TUBB3-213ENST00000557262 EDDM13A0A1B0GTR0 161 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 SRRM3A6NNA2 597 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-213ENST00000557262 BECN2A8MW95 431 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 TTC34A8MYJ7 566 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 F5H5T6 163 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 FLRT2O43155 660 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 GLI1P08151 1106 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 SLC2A3P11169 496 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 SLC8A1P32418 973 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 CTSOP43234 321 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-213ENST00000557262 GALCP54803 685 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 CDK17Q00537 523 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 PDCLQ13371 301 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 SLC12A1Q13621 1099 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 TAF5Q15542 800 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 CST6Q15828 149 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 CAMK4Q16566 473 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 EXOC3L4Q17RC7 722 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 EFHC1Q5JVL4 640 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-213ENST00000557262 SMYD5Q6GMV2 418 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 SLCO6A1Q86UG4 719 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 MMAAQ8IVH4 418 aaKnown RBP16.42■□□□□ 0.22
TUBB3-213ENST00000557262 APCDD1Q8J025 514 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 FAM129BQ96TA1 746 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 CDC6Q99741 560 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 NEUROG2Q9H2A3 272 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 CEP83Q9Y592 693 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 ITIH6Q6UXX5 1313 aa16.42■□□□□ 0.22
TUBB3-213ENST00000557262 GTPBP10A4D1E9 387 aaKnown RBP16.41■□□□□ 0.22
TUBB3-213ENST00000557262 FAM47DPA6NHR8 397 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 MID1O15344 667 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 IGHV4-34P06331 123 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 ABCB4P21439 1286 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 NNMTP40261 264 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 PITX1P78337 314 aaPredicted RBP16.41■□□□□ 0.22
TUBB3-213ENST00000557262 PTK2Q05397 1052 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 DEFB106AQ8N104 65 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 BAHD1Q8TBE0 780 aaPredicted RBP16.41■□□□□ 0.22
TUBB3-213ENST00000557262 SHC3Q92529 594 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 PTPRN2Q92932 1015 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 RNF34Q969K3 372 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 IGSF8Q969P0 613 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 PPP1R13BQ96KQ4 1090 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 RPL10LQ96L21 214 aaKnown RBP16.41■□□□□ 0.22
TUBB3-213ENST00000557262 PRMT1Q99873 361 aaKnown RBP16.41■□□□□ 0.22
TUBB3-213ENST00000557262 OMDQ99983 421 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 ORAI3Q9BRQ5 295 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 ASNSD1Q9NWL6 643 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 ADAMTS1Q9UHI8 967 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 DMXL2Q8TDJ6 3036 aa16.41■□□□□ 0.22
TUBB3-213ENST00000557262 A0A1W2PP55 124 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 A0A1W2PPC4 97 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 LRRC72A6NJI9 287 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 KCNK3O14649 394 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 RNASEH2AO75792 299 aaKnown RBP16.4■□□□□ 0.22
TUBB3-213ENST00000557262 PON1P27169 355 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 CCR1P32246 355 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 PLK1P53350 603 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 OXCT1P55809 520 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 SNX16P57768 344 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 UBE2HP62256 183 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 RACK1P63244 317 aaKnown RBP16.4■□□□□ 0.22
TUBB3-213ENST00000557262 APBA1Q02410 837 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 NCEH1Q6PIU2 408 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 ADAT2Q7Z6V5 191 aaKnown RBP16.4■□□□□ 0.22
TUBB3-213ENST00000557262 IRF2BP1Q8IU81 584 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 CCAR2Q8N163 923 aaKnown RBP16.4■□□□□ 0.22
TUBB3-213ENST00000557262 NOX5Q96PH1 765 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 SLC2A13Q96QE2 648 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 PPP1R9BQ96SB3 815 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 CPXM1Q96SM3 734 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 FAM204AQ9H8W3 233 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 DDIT4Q9NX09 232 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 SERGEFQ9UGK8 458 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 RALYQ9UKM9 306 aaKnown RBP16.4■□□□□ 0.22
TUBB3-213ENST00000557262 FZD4Q9ULV1 537 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 KNL1Q8NG31 2342 aa16.4■□□□□ 0.22
TUBB3-213ENST00000557262 SYNJ2BP-COX16A0A087WUM0 186 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 PCDHGA12O60330 932 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 DFNA5O60443 496 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 HSF2BPO75031 334 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 CAPNS1P04632 268 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 GOT1P17174 413 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 C5AR1P21730 350 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 CTSKP43235 329 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 C21orf59P57076 290 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 MTA1Q13330 715 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 KCNT1Q5JUK3 1230 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 RABGAP1LQ5R372 815 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 TTC39BQ5VTQ0 682 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms