RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ARHGEF19Q8IW93 802 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 CD302Q8IX05 232 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 RPUSD2Q8IZ73 545 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 NME8Q8N427 588 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 LRRC71Q8N4P6 559 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 MMGT1Q8N4V1 131 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ZSWIM2Q8NEG5 633 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 OR6J1Q8NGC5 347 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ZBTB45Q96K62 511 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 RPS6KC1Q96S38 1066 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 OSBPL9Q96SU4 736 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 MMS19Q96T76 1030 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 CGRRF1Q99675 332 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 C16orf70Q9BSU1 422 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 TLR10Q9BXR5 811 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 IMPG2Q9BZV3 1241 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 INO80BQ9C086 356 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 OR10A2Q9H208 303 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 PDE11AQ9HCR9 933 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 PTPRHQ9HD43 1115 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ARFGAP3Q9NP61 516 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 SEPT11Q9NVA2 429 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 ANKFY1Q9P2R3 1169 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.73□□□□□ -1.65
SRP54-212ENST00000556992 CPA4Q9UI42 421 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 NOCTQ9UK39 431 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 AJAP1Q9UKB5 411 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 CPSF3Q9UKF6 684 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 ZHX1Q9UKY1 873 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 V9GYY5 206 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 CDK5RAP2Q96SN8 1893 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 NRCAMQ92823 1304 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PASKQ96RG2 1323 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CNTNAP2Q9UHC6 1331 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TRAV20A0A0B4J274 112 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 A0A0G2JNJ9 132 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 A0A0U1RQG5 324 aaPredicted RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 A0A1B0GUA9 196 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CCDC151A5D8V7 595 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MIF4GDA9UHW6 222 aaKnown RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 RAMP2O60895 175 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 SRGAP2O75044 1071 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PPFIA2O75334 1257 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MTA2O94776 668 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TNNC2P02585 160 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CYP1A2P05177 515 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MMP3P08254 477 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MMEP08473 750 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CHRNB2P17787 502 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 ATICP31939 592 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PIK3CAP42336 1068 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TM4SF4P48230 202 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CPT1AP50416 773 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PDE6CP51160 858 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 YWHAEP62258 255 aaKnown RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 IGBP1P78318 339 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PURAQ00577 322 aaKnown RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 HHEXQ03014 270 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 COL10A1Q03692 680 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MBTD1Q05BQ5 628 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 HNRNPA0Q13151 305 aaKnown RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 DRP2Q13474 957 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CUL2Q13617 745 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TMEM63BQ5T3F8 832 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 LIN9Q5TKA1 542 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TRIM68Q6AZZ1 485 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 ACAD10Q6JQN1 1059 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 WDR93Q6P2C0 686 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 Q6ZRM9 215 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 PEX26Q7Z412 305 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 DAAM2Q86T65 1068 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 NOP9Q86U38 636 aaKnown RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 RASAL3Q86YV0 1011 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TMPRSS6Q8IU80 811 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 BRSK2Q8IWQ3 736 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 KIAA0319LQ8IZA0 1049 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 NLGN4XQ8N0W4 816 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TTC39CQ8N584 583 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 LINC01465Q8N7H1 131 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 LRRC57Q8N9N7 239 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 MSANTD4Q8NCY6 345 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 SPATA4Q8NEY3 305 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 LNX1Q8TBB1 728 aaPredicted RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 SOCS4Q8WXH5 440 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 RFFLQ8WZ73 363 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 RUBCNQ92622 972 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 USP6NLQ92738 828 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 SGSM3Q96HU1 749 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 VCPIP1Q96JH7 1222 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 CAPZA3Q96KX2 299 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 NLRP4Q96MN2 994 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 TSPAN18Q96SJ8 248 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 NAP1L3Q99457 506 aaPredicted RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 CCDC94Q9BW85 323 aaPredicted RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 PACSIN1Q9BY11 444 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 GCOM2Q9BZD3 368 aaPredicted RBP4.72□□□□□ -1.65
SRP54-212ENST00000556992 HAPLN2Q9GZV7 340 aa4.72□□□□□ -1.65
SRP54-212ENST00000556992 FAM124BQ9H5Z6 455 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms