RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CFAP161Q6P656 301 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 PIK3AP1Q6ZUJ8 805 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 LRRC8DQ7L1W4 858 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 SAMD14Q8IZD0 417 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-210ENST00000556718 METTL25Q8N6Q8 603 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 PDILTQ8N807 584 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 STAMQ92783 540 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 RBM17Q96I25 401 aaKnown RBP4.79□□□□□ -1.64
PRPF39-210ENST00000556718 MECRQ9BV79 373 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 CINPQ9BW66 212 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-210ENST00000556718 PRSS22Q9GZN4 317 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 PLEKHA5Q9HAU0 1116 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 PDGFCQ9NRA1 345 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 RXFP3Q9NSD7 469 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 BLOC1S4Q9NUP1 217 aa4.79□□□□□ -1.64
PRPF39-210ENST00000556718 CACNA1IQ9P0X4 2223 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 LMTK3Q96Q04 1460 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 A0A087X0M5 115 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 A0A1B0GX30 115 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 FAM90A20PA6NIJ5 464 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 ZBED4O75132 1171 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 PMPCBO75439 489 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 VNN1O95497 513 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 FESP07332 822 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 GRK5P34947 590 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 PAFAH1B1P43034 410 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 TXNL4AP83876 142 aaKnown RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 SP2Q02086 613 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 TBL3Q12788 808 aaKnown RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 MTAPQ13126 283 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 PRKG2Q13237 762 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 KCTD2Q14681 263 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 AAK1Q2M2I8 961 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 AASDHQ4L235 1098 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 WDR45BQ5MNZ6 344 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 ARMC8Q8IUR7 673 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 SIRT6Q8N6T7 355 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 PTGR2Q8N8N7 351 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 FAM71DQ8N9W8 422 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 TBC1D5Q92609 795 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 CENPIQ92674 756 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 RNF125Q96EQ8 232 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 MCRS1Q96EZ8 462 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 PPP1R10Q96QC0 940 aaKnown RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 OSBPL5Q9H0X9 879 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 ACAD9Q9H845 621 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 PLEKHA2Q9HB19 425 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 KCNK9Q9NPC2 374 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 SNX15Q9NRS6 342 aa4.78□□□□□ -1.64
PRPF39-210ENST00000556718 CNOT7Q9UIV1 285 aaKnown RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 TRPC5Q9UL62 973 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-210ENST00000556718 LOC105369274A0A096LPK9 316 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 LOC102723532A0A0G2JNH3 316 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 K7ENM7 598 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 PEX12O00623 359 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 TSPAN4O14817 238 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 INSIG1O15503 277 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 NKX2-8O15522 239 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 TMPRSS11DO60235 418 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 SNHG28P0DPA3 235 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 CHMP24386 653 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 GKP32189 559 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 IGHMBP2P38935 993 aaKnown RBP4.77□□□□□ -1.65
PRPF39-210ENST00000556718 CLCN2P51788 898 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 RCAN1P53805 252 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 LINC00205P59089 165 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 BAK1Q16611 211 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 TBC1D25Q3MII6 688 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 AARS2Q5JTZ9 985 aaKnown RBP4.77□□□□□ -1.65
PRPF39-210ENST00000556718 ZNF484Q5JVG2 852 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 LIPMQ5VYY2 423 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 WDR93Q6P2C0 686 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 DENND1BQ6P3S1 775 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 MAVSQ7Z434 540 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 CHSY1Q86X52 802 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 CNGA4Q8IV77 575 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 OR4N4Q8N0Y3 316 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 TDRD7Q8NHU6 1098 aaKnown RBP4.77□□□□□ -1.65
PRPF39-210ENST00000556718 SLC2A12Q8TD20 617 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 TBC1D22AQ8WUA7 517 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 HMCESQ96FZ2 354 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 C5orf34Q96MH7 638 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 NEUROD6Q96NK8 337 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 MACROD1Q9BQ69 325 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 TUBA8Q9NY65 449 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-210ENST00000556718 DLL3Q9NYJ7 618 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 ORC3Q9UBD5 711 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-210ENST00000556718 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 RAB21Q9UL25 225 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 SLC12A4Q9UP95 1085 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 GDAQ9Y2T3 454 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 PCDHA10Q9Y5I2 948 aa4.77□□□□□ -1.65
PRPF39-210ENST00000556718 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 A0A1W2PPH5 198 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 AGAP5A6NIR3 686 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 PRSS47A8MTI9 375 aa4.76□□□□□ -1.65
PRPF39-210ENST00000556718 H3BNC9 293 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms