RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SLC14A1Q13336 389 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 HNRNPDQ14103 355 aaKnown RBP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 KCNJ12Q14500 433 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 TRIP6Q15654 476 aaKnown RBP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 HNRNPA1L2Q32P51 320 aaKnown RBP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 ACCSLQ4AC99 568 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 IL27RAQ6UWB1 636 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 UNQ6494/PRO21346Q6UXR6 183 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SND1Q7KZF4 910 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 PIP4P1Q86T03 277 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 MMAAQ8IVH4 418 aaKnown RBP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 NAXDQ8IW45 347 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 CCAR2Q8N163 923 aaKnown RBP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 BIRC7Q96CA5 298 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SIK2Q9H0K1 926 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 PCED1AQ9H1Q7 454 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 RSPH9Q9H1X1 276 aaPredicted RBP10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SIX2Q9NPC8 291 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 TM7SF3Q9NS93 570 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 ASNSD1Q9NWL6 643 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 FBXL12Q9NXK8 326 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SLCO3A1Q9UIG8 710 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SLC25A13Q9UJS0 675 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 SCML1Q9UN30 329 aa10.92□□□□□ -0.66
SPTLC2-205ENST00000556607 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 ASCC3Q8N3C0 2202 aaKnown RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 EDDM13A0A1B0GTR0 161 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 TARSL2A2RTX5 802 aaKnown RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 MID1O15344 667 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 BNIP3LO60238 219 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 IL1BP01584 269 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 IGLV3-25P01717 112 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 TPM2P07951 284 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 MZF1P28698 734 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 ERCC5P28715 1186 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 SLC8A1P32418 973 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 NOS2P35228 1153 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 GGCXP38435 758 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 STK19P49842 368 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 SULT1E1P49888 294 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 AFF3P51826 1226 aaKnown RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 FAM193AP78312 1265 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 ZNF177Q13360 481 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 SLC12A1Q13621 1099 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 DRAP1Q14919 205 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 CST6Q15828 149 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 HLA-BQ31612 363 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 PTPN20Q4JDL3 420 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 TTC39BQ5VTQ0 682 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 STK40Q8N2I9 435 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 TMEM35BQ8NCS4 154 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 MYO19Q96H55 970 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 LMLNQ96KR4 655 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 MRGPRX3Q96LB0 322 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 SLC2A13Q96QE2 648 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 PPP1R9BQ96SB3 815 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 NEUROG2Q9H2A3 272 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 PABPC3Q9H361 631 aaKnown RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 WDCPQ9H6R7 721 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 IL21RQ9HBE5 538 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 SAMSN1Q9NSI8 373 aaKnown RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 VANGL2Q9ULK5 521 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 FHOD1Q9Y613 1164 aa10.91□□□□□ -0.66
SPTLC2-205ENST00000556607 GON4LQ3T8J9 2241 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 A0A1B0GVM2 712 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 TCAF2A6NFQ2 919 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 LRRC72A6NJI9 287 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 GOLGA8CPA6NN73 597 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 KCNK3O14649 394 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 DAB1O75553 588 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 TRIM16O95361 564 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 PROS1P07225 676 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 ZNF18P17022 549 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 CD27P26842 260 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 OXCT1P55809 520 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 C21orf59P57076 290 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 CENPCQ03188 943 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 DEUP1Q05D60 604 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 SULT2A1Q06520 285 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 AUHQ13825 339 aaKnown RBP10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 SUZ12Q15022 739 aaKnown RBP10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 MIIPQ5JXC2 388 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 C9orf64Q5T6V5 341 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 FAM102AQ5T9C2 384 aaPredicted RBP10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 KLHDC7AQ5VTJ3 777 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 KIAA0895LQ68EN5 471 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 FBXL22Q6P050 247 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 OLFML1Q6UWY5 402 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 LAYNQ6UX15 382 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 USP30Q70CQ3 517 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 ERICH1Q86X53 443 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 ZDHHC17Q8IUH5 632 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 CHCHD4Q8N4Q1 142 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 MSANTD4Q8NCY6 345 aa10.9□□□□□ -0.66
SPTLC2-205ENST00000556607 OR14C36Q8NHC7 312 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms