RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 C14orf80Q86SX3 495 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 KIAA2013Q8IYS2 634 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 ZNF683Q8IZ20 524 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 MCOLN2Q8IZK6 566 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 KDM1BQ8NB78 822 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 IGSF8Q969P0 613 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 HAPLN3Q96S86 360 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 SIK2Q9H0K1 926 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 HAUS4Q9H6D7 363 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 FBRSQ9HAH7 460 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
SLIRP-206ENST00000556375 ITIH6Q6UXX5 1313 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 SIGLEC16A6NMB1 481 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 HLA-EP13747 358 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 GPD1P21695 349 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 COPAP53621 1224 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 CDH4P55283 916 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 CDO1Q16878 200 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 C15orf59Q2T9L4 293 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 LRRC31Q6UY01 552 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 ZNF571Q7Z3V5 609 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 METTL3Q86U44 580 aaKnown RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 OR2T3Q8NH03 318 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 CENPIQ92674 756 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 ERLEC1Q96DZ1 483 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 MYO19Q96H55 970 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 VCPIP1Q96JH7 1222 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 C1orf74Q96LT6 269 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 XPO4Q9C0E2 1151 aaKnown RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 MKRN2Q9H000 416 aaKnown RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 SLC6A17Q9H1V8 727 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 PRDM16Q9HAZ2 1276 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-206ENST00000556375 USP18Q9UMW8 372 aa11.88□□□□□ -0.51
SLIRP-206ENST00000556375 CHD5Q8TDI0 1954 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 IGLV3-10A0A075B6K4 115 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 IGHV1OR15-9A0A0B4J2B8 117 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 E9PAM4 449 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 DDX3XO00571 662 aaKnown RBP eCLIP11.87□□□□□ -0.514e-31■■■■□ 19.9
SLIRP-206ENST00000556375 FOXD2O60548 495 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 GYPCP04921 128 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 SRPRAP08240 638 aaKnown RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 C7P10643 843 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 GZMAP12544 262 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 RRM1P23921 792 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 MPLP40238 635 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ZNF143P52747 638 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 PLK1P53350 603 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 HDAC4P56524 1084 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ZBED6P86452 979 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ECT2LQ008S8 904 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 NRG1Q02297 640 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 LMNB2Q03252 620 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ZNF177Q13360 481 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ARID5BQ14865 1188 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 CSRP2Q16527 193 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 SPDYCQ5MJ68 293 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 SLC36A4Q6YBV0 504 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 TMPRSS6Q8IU80 811 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 APCDD1Q8J025 514 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ZNF366Q8N895 744 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 FAM172AQ8WUF8 416 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ARRDC1-AS1Q9H2J1 176 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 TMPRSS4Q9NRS4 437 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 SEMA4GQ9NTN9 838 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 CAPN11Q9UMQ6 739 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 CYP8B1Q9UNU6 501 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 ERVW-1Q9UQF0 538 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 TBC1D30Q9Y2I9 924 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 SNX10Q9Y5X0 201 aa11.87□□□□□ -0.51
SLIRP-206ENST00000556375 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
SLIRP-206ENST00000556375 LAMA1P25391 3075 aa11.86□□□□□ -0.51
SLIRP-206ENST00000556375 BCLAF3A2AJT9 711 aaKnown RBP11.86□□□□□ -0.51
SLIRP-206ENST00000556375 DRGXA6NNA5 263 aa11.86□□□□□ -0.51
SLIRP-206ENST00000556375 TMCO5BA8MYB1 307 aa11.86□□□□□ -0.51
SLIRP-206ENST00000556375 MAP3K13O43283 966 aa11.86□□□□□ -0.51
SLIRP-206ENST00000556375 AP5Z1O43299 807 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms