RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 STARD3Q14849 445 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 MAPRE1Q15691 268 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 BROXQ5VW32 411 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 TDRD10Q5VZ19 366 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ADALQ6DHV7 355 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 FBXL19Q6PCT2 694 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 SMYD4Q8IYR2 804 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ADGRF2Q8IZF7 708 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 TOP6BLQ8N6T0 577 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ZNF248Q8NDW4 579 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 SNRNP27Q8WVK2 155 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 CNDP2Q96KP4 475 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 LGMNQ99538 433 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 TM9SF3Q9HD45 589 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 KCND2Q9NZV8 630 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 CDH9Q9ULB4 789 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 AGAP1Q9UPQ3 857 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 STON1Q9Y6Q2 735 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ANAPC1Q9H1A4 1944 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 RELNP78509 3460 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NBASA2RRP1 2371 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 OBSL1O75147 1896 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NPHP3-ACAD11A0A0J9YXS1 232 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 A0A1B0GTQ1 180 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 PP2D1A8MPX8 630 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ANKRD63C9JTQ0 380 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NEDD8-MDP1E9PL57 170 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 F8VP50 259 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CBX4O00257 560 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NPC1O15118 1278 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 COCHO43405 550 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 EPB41L2O43491 1005 aaKnown RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CACNG3O60359 315 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 PLA2G4BP0C869 781 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 TYRP14679 529 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 PLCG1P19174 1290 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 LMO2P25791 158 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CTSKP43235 329 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ACADVLP49748 655 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SLC12A3P55017 1021 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 IL9RQ01113 521 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 DNAJC3Q13217 504 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ILKQ13418 452 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ENPP2Q13822 863 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SOWAHAQ2M3V2 549 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ARSHQ5FYA8 562 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 KCNT1Q5JUK3 1230 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 TTC38Q5R3I4 469 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 HECTD3Q5T447 861 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SCARA3Q6AZY7 606 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SLFN12LQ6IEE8 588 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CRELD2Q6UXH1 353 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 DPH6Q7L8W6 267 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 LIMS2Q7Z4I7 341 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CSGALNACT2Q8N6G5 542 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 LRRC52Q8N7C0 313 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NSUN7Q8NE18 718 aaKnown RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 RFFLQ8WZ73 363 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SNX19Q92543 992 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 PRCCQ92733 491 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 WBP2Q969T9 261 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 MYLPFQ96A32 169 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NAF1Q96HR8 494 aaKnown RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 C8orf48Q96LL4 319 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SLITRK1Q96PX8 696 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SYT15Q9BQS2 421 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 MMTAG2Q9BU76 263 aaKnown RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 BBS2Q9BXC9 721 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 C6orf106Q9H6K1 298 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CPNE5Q9HCH3 593 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CRTAC1Q9NQ79 661 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 THAP10Q9P2Z0 257 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 CHORDC1Q9UHD1 332 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 AGO2Q9UKV8 859 aaKnown RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-236ENST00000556220 SNX9Q9Y5X1 595 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 STYXL1Q9Y6J8 313 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 NUMA1Q14980 2115 aa7.24□□□□□ -1.25
ATXN3-236ENST00000556220 ARID1BQ8NFD5 2236 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 TLN1Q9Y490 2541 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 LAD1O00515 517 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 SYNCRIPO60506 623 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 GREM1O60565 184 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 IL18RAPO95256 599 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ITGB3P05106 788 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 PDGFRBP09619 1106 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 FAM87AP0C7U9 286 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ACADMP11310 421 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 KRT10P13645 584 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 ACO1P21399 889 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 GLDCP23378 1020 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 YWHAQP27348 245 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 TRAPPC10P48553 1259 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 PSMC1P62191 440 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 RBP5P82980 135 aa7.23□□□□□ -1.25
ATXN3-236ENST00000556220 TFAMQ00059 246 aaKnown RBP7.23□□□□□ -1.25
ATXN3-236ENST00000556220 GTF2BQ00403 316 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms