RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 FRMD8P1Q9BZ68 369 aaPredicted RBP15.2■□□□□ 0.02
CUX1-215ENST00000556210 NCF1BA6NI72 391 aaPredicted RBP15.19■□□□□ 0.02
CUX1-215ENST00000556210 YJEFN3A6XGL0 299 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 MEIS3P2A8K0S8 358 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 NCF1CA8MVU1 366 aaPredicted RBP15.19■□□□□ 0.02
CUX1-215ENST00000556210 LTFP02788 710 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 NCF1P14598 390 aaPredicted RBP15.19■□□□□ 0.02
CUX1-215ENST00000556210 CCNB1P14635 433 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 SP100P23497 879 aaPredicted RBP15.19■□□□□ 0.02
CUX1-215ENST00000556210 PCSK1P29120 753 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 PNPLA4P41247 253 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 GRM5P41594 1212 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 CXCR3P49682 368 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 BTKQ06187 659 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 SNX17Q15036 470 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 ANO4Q32M45 955 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 KCNMB4Q86W47 210 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 MFN1Q8IWA4 741 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 NDNQ99608 321 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 POPDC2Q9HBU9 364 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 ANLNQ9NQW6 1124 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 MAP3K10Q02779 954 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 ACAP1Q15027 740 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 DNAL1Q4LDG9 190 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 FSCBQ5H9T9 825 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 MAP3K21Q5TCX8 1036 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 BANPQ8N9N5 519 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 DCAKDQ8WVC6 231 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 Q9H521 79 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 ARHGEF38Q9NXL2 777 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 GSC2O15499 205 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 TADA2AO75478 443 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 ITGA2BP08514 1039 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 EPHA3P29320 983 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 MATKP42679 507 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 FBXO48Q5FWF7 155 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 FNIP1Q8TF40 1166 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 CADM1Q9BY67 442 aaKnown RBP15.19■□□□□ 0.02
CUX1-215ENST00000556210 RRAGCQ9HB90 399 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 ARHGEF4Q9NR80 690 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 AK5Q9Y6K8 562 aa15.19■□□□□ 0.02
CUX1-215ENST00000556210 SLC15A5A6NIM6 579 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 PRPF4O43172 522 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■□□□ 11.6
CUX1-215ENST00000556210 STRNO43815 780 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 MT-CYBP00156 380 aaPredicted RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 ZNF132P52740 706 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 LILRA4P59901 499 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 TSTA3Q13630 321 aaPredicted RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 ZNF460Q14592 562 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 PDPK2PQ6A1A2 396 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 RINLQ6ZS11 566 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ICA1LQ8NDH6 482 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 GSTCDQ8NEC7 633 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ST3GAL5Q9UNP4 418 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 MYO9BQ13459 2157 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ZBTB24O43167 697 aaPredicted RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 IRF1P10914 325 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 DARSP14868 501 aaKnown RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 GP5P40197 560 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CLCNKBP51801 687 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CYTH1Q15438 398 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 FSCN1Q16658 493 aaKnown RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 DUSP28Q4G0W2 176 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 LDB1Q86U70 411 aaPredicted RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 CEP70Q8NHQ1 597 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 B3GALT6Q96L58 329 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 OLFM3Q96PB7 478 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ZNF670Q9BS34 389 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CRYL1Q9Y2S2 319 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 PLLPQ9Y342 182 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CDY2AQ9Y6F7 541 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 LTBP4Q8N2S1 1624 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ATP6AP2A0A1C7CYW4 349 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CCDC189A1A4V9 331 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ATP6AP2O75787 350 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 SUPT7LO94864 414 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ATP6V1B1P15313 513 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CYP3A5P20815 502 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 NOS2P35228 1153 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CPT1AP50416 773 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 ZNF470Q6ECI4 717 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 CERS2Q96G23 380 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 RPRD1AQ96P16 312 aaPredicted RBP15.18■□□□□ 0.02
CUX1-215ENST00000556210 PSAT1Q9Y617 370 aa15.18■□□□□ 0.02
CUX1-215ENST00000556210 MDM4O15151 490 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 FGFR1P11362 822 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 ALADP13716 330 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 C10orf120Q5SQS8 335 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 TMCO4Q5TGY1 634 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 PQLC3Q8N755 202 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 RBM15BQ8NDT2 890 aaKnown RBP15.17■□□□□ 0.02
CUX1-215ENST00000556210 PIWIL2Q8TC59 973 aaKnown RBP15.17■□□□□ 0.02
CUX1-215ENST00000556210 THAP1Q9NVV9 213 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 TAGLN3Q9UI15 199 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 LRFN2Q9ULH4 789 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 LINGO3P0C6S8 592 aa15.17■□□□□ 0.02
CUX1-215ENST00000556210 GFAPP14136 432 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms