RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 EEF2KO00418 725 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 CREB3O43889 395 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 RECQL4O94761 1208 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 RALBP11234 206 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 FGF3P11487 239 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 ANPEPP15144 967 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PSMB4P28070 264 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ADORA2AP29274 412 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SPRP35270 261 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 ADCYAP1R1P41586 468 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 TAF6P49848 677 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SERPINB8P50452 374 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 DSG1Q02413 1049 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 TMEM62Q0P6H9 643 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ADIGQ0VDE8 80 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PCLAFQ15004 111 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ZNF792Q3KQV3 632 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 FSCBQ5H9T9 825 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MARCH8Q5T0T0 291 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 TEDDM1Q5T9Z0 273 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 GRTP1Q5TC63 336 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 CES4AQ5XG92 561 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 C16orf46Q6P387 395 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 RFX8Q6ZV50 586 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MOB2Q70IA6 237 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 DEFB106AQ8N104 65 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PYROXD2Q8N2H3 581 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PXYLP1Q8TE99 480 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 KBTBD7Q8WVZ9 684 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 CMTM5Q96DZ9 223 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 CERS2Q96G23 380 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 EBF4Q9BQW3 602 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PRR14Q9BWN1 585 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 EIF2AQ9BY44 585 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 LRRC40Q9H9A6 602 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 LRRC4Q9HBW1 653 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 DNAJC28Q9NX36 388 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 GDAP2Q9NXN4 497 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 BFARQ9NZS9 450 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 COX16Q9P0S2 106 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 KLHL8Q9P2G9 620 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 SLC7A8Q9UHI5 535 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PLA2G4CQ9UP65 541 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 RAD54BQ9Y620 910 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 CDY2AQ9Y6F7 541 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 CDY1Q9Y6F8 540 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 RPS6KL1Q9Y6S9 549 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 DPPA5A6NC42 116 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MAGEA13PA6NCF6 341 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 UNCXA6NJT0 531 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ERI2A8K979 691 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 GPR37O15354 613 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 NCAM2O15394 837 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MTSS1O43312 755 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SIN3BO75182 1162 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 H2AFYO75367 372 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 LYPLA1O75608 230 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 BAG2O95816 211 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 TOP3BO95985 862 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 PROCP04070 461 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MMP3P08254 477 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SLC10A3P09131 477 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 CPA3P15088 417 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 AXLP30530 894 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 HOXA11P31270 313 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 NOS2P35228 1153 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 AIF1P55008 147 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ABCE1P61221 599 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 DEUP1Q05D60 604 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 GSTA3Q16772 222 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 HSF5Q4G112 596 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 AAGABQ6PD74 315 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MYLK4Q86YV6 388 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 C10orf107Q8IVU9 208 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 UNC5BQ8IZJ1 945 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 DNAAF3Q8N9W5 541 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
TDP1-213ENST00000555880 OR6J1Q8NGC5 347 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 FBXO27Q8NI29 283 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 FAM136AQ96C01 138 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 TSNARE1Q96NA8 513 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PANX3Q96QZ0 392 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 NR1H4Q96RI1 486 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 LBHD1Q9BQE6 289 aaPredicted RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MAGEB5Q9BZ81 275 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PPP1R12CQ9BZL4 782 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 YIPF3Q9GZM5 350 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 C20orf27Q9GZN8 174 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ADAMTS10Q9H324 1103 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 NXF3Q9H4D5 531 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 SLC24A3Q9HC58 644 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SETD4Q9NVD3 440 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 PIH1D1Q9NWS0 290 aaKnown RBP7.17□□□□□ -1.26
TDP1-213ENST00000555880 SYBUQ9NX95 663 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 DLGAP2Q9P1A6 1054 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 IGSF9Q9P2J2 1179 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 SLC17A6Q9P2U8 582 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 COPG2Q9UBF2 871 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MID2Q9UJV3 735 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms