RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 GCOM1H8Y6P7 765 aaPredicted RBP5.94□□□□□ -1.46
VRK1-205ENST00000555402 ANP32CO43423 234 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 PRAMEF2O60811 474 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 TJP3O95049 919 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 CD4P01730 458 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 ALDOAP04075 364 aaKnown RBP5.94□□□□□ -1.46
VRK1-205ENST00000555402 MATN1P21941 496 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 PCSK6P29122 969 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 PGM1P36871 562 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 CCT8P50990 548 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 TAS2R50P59544 299 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 GPC5P78333 572 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 TLE3Q04726 772 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.94□□□□□ -1.46
VRK1-205ENST00000555402 FAM180BQ6P0A1 224 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 SFTPA1Q8IWL2 248 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 PTGR2Q8N8N7 351 aaPredicted RBP5.94□□□□□ -1.46
VRK1-205ENST00000555402 SLC2A12Q8TD20 617 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 HDAC2Q92769 488 aaKnown RBP5.94□□□□□ -1.46
VRK1-205ENST00000555402 ARRDC3Q96B67 414 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 SENP7Q9BQF6 1050 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 ELOVL1Q9BW60 279 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 FSD1LQ9BXM9 530 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 TMX4Q9H1E5 349 aaPredicted RBP5.94□□□□□ -1.46
VRK1-205ENST00000555402 CDCP1Q9H5V8 836 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 RCE1Q9Y256 329 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 AFG3L2Q9Y4W6 797 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 LMTK3Q96Q04 1460 aa5.94□□□□□ -1.46
VRK1-205ENST00000555402 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.93□□□□□ -1.46
VRK1-205ENST00000555402 TTC34A8MYJ7 566 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 H3BNC9 293 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 EXOC3O60645 756 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 CYP3A4P08684 503 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 CHN1P15882 459 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 EPHB2P29323 1055 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 NR1H2P55055 460 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 NAPRTQ6XQN6 538 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 YTHDF3Q7Z739 585 aaKnown RBP5.93□□□□□ -1.46
VRK1-205ENST00000555402 SRFBP1Q8NEF9 429 aaKnown RBP5.93□□□□□ -1.46
VRK1-205ENST00000555402 CLEC4CQ8WTT0 213 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 ST8SIA4Q92187 359 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 TRMT61AQ96FX7 289 aaKnown RBP5.93□□□□□ -1.46
VRK1-205ENST00000555402 SNX18Q96RF0 628 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 CIPCQ9C0C6 399 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 PAIP1Q9H074 479 aaKnown RBP5.93□□□□□ -1.46
VRK1-205ENST00000555402 CLPBQ9H078 707 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 PREBQ9HCU5 417 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 ABHD10Q9NUJ1 306 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 FBXO9Q9UK97 447 aaPredicted RBP5.93□□□□□ -1.46
VRK1-205ENST00000555402 TBX20Q9UMR3 447 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 SUFUQ9UMX1 484 aa5.93□□□□□ -1.46
VRK1-205ENST00000555402 C3orf70A6NLC5 250 aaPredicted RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 PEX12O00623 359 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 PPEF2O14830 753 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 EIF5BO60841 1220 aaKnown RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 CSF1P09603 554 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 DUSP1P28562 367 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 MPGP29372 298 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 PNPLA4P41247 253 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 CASP2P42575 452 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 FOXL2P58012 376 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 RUNDC3AQ59EK9 446 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 RNASE12Q5GAN4 147 aaKnown RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 AARS2Q5JTZ9 985 aaKnown RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 WDR45BQ5MNZ6 344 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 CBWD5Q5RIA9 395 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 ANO7Q6IWH7 933 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 CLEC4GQ6UXB4 293 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 KIAA1324Q6UXG2 1013 aaKnown RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 SLC29A4Q7RTT9 530 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 TSPYL6Q8N831 410 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 AKAP1Q92667 903 aaKnown RBP eCLIP5.92□□□□□ -1.46
VRK1-205ENST00000555402 EDC3Q96F86 508 aaKnown RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 PPP1R10Q96QC0 940 aaKnown RBP5.92□□□□□ -1.46
VRK1-205ENST00000555402 MMS19Q96T76 1030 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 ACAD9Q9H845 621 aa5.92□□□□□ -1.46
VRK1-205ENST00000555402 GRM8O00222 908 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 FYB1O15117 783 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 WEE2P0C1S8 567 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 ACP5P13686 325 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 TNNT1P13805 278 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 CERS1P27544 350 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 SLC8A1P32418 973 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 AGTR2P50052 363 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 CFHR3Q02985 330 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 GOLGA8FQ08AF8 430 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 MFSD13AQ14CX5 517 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 GPR68Q15743 365 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 CNGA3Q16281 694 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 HYIQ5T013 277 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 ZNF66Q6ZN08 573 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 LRRC8DQ7L1W4 858 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 ZNF804AQ7Z570 1209 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 MAFAQ8NHW3 353 aaPredicted RBP5.91□□□□□ -1.46
VRK1-205ENST00000555402 UCMAQ8WVF2 138 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 KCNJ9Q92806 393 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 ZUFSPQ96AP4 578 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 HERC2P3Q9BVR0 1158 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 ARHGAP39Q9C0H5 1083 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 SERGEFQ9UGK8 458 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms