RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 ZNF292O60281 2723 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TCRBV5S1A1TA0A578 114 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TYW5A2RUC4 315 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 C2CD4BA6NLJ0 364 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZBTB24O43167 697 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SYNCRIPO60506 623 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SRGAP2O75044 1071 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ENDOD1O94919 500 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CALB1P05937 261 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ATP5BP06576 529 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DLDP09622 509 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 KLHL30Q0D2K2 578 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 EIF4HQ15056 248 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PITRM1Q5JRX3 1037 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 BRMS1LQ5PSV4 323 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 LRSAM1Q6UWE0 723 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CCDC117Q8IWD4 279 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TMEFF1Q8IYR6 380 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZNF683Q8IZ20 524 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SELENOOQ9BVL4 669 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 EDEM3Q9BZQ6 932 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 XPO4Q9C0E2 1151 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TMEM245Q9H330 911 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MPP6Q9NZW5 540 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 KIAA1522Q9P206 1035 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SLCO3A1Q9UIG8 710 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 GVINP1Q7Z2Y8 2422 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DRGXA6NNA5 263 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DDX3XO00571 662 aaKnown RBP eCLIP12.8□□□□□ -0.366e-12■□□□□ 9.5
TRAPPC6B-205ENST00000555269 NPC1O15118 1278 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RHOBTB1O94844 696 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RRM1P23921 792 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 COPAP53621 1224 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 STARD3Q14849 445 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ALFQ53S48 1182 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FIGNQ5HY92 759 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 KIAA1324Q6UXG2 1013 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TMPRSS6Q8IU80 811 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 C3orf20Q8ND61 904 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CENPIQ92674 756 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MYO19Q96H55 970 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RPL10LQ96L21 214 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MRGPRX3Q96LB0 322 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 C1orf74Q96LT6 269 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 NUP58Q9BVL2 599 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PRDM16Q9HAZ2 1276 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PRSS16Q9NQE7 514 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CYP8B1Q9UNU6 501 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ERVW-1Q9UQF0 538 aa12.8□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DMXL1Q9Y485 3027 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TTC34A8MYJ7 566 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FTLP02792 175 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PLEKP08567 350 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SDC4P31431 198 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RDXP35241 583 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ADRA1BP35368 520 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PRKCIP41743 596 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PTGER3P43115 390 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DHPSP49366 369 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ECT2LQ008S8 904 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CREB5Q02930 508 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ELF2Q15723 593 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PLEKHG6Q3KR16 790 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 C5orf22Q49AR2 442 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 HGSNATQ68CP4 663 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PMS2CLQ68D20 193 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ARMCX6Q7L4S7 300 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CACUL1Q86Y37 369 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ALG14Q96F25 216 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 LOXL4Q96JB6 756 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FEM1AQ9BSK4 669 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SEMA4GQ9NTN9 838 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CAPN11Q9UMQ6 739 aa12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-205ENST00000555269 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 A0A1B0GVM2 712 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 A0A1W2PQJ5 194 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TCAF2A6NFQ2 919 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 E9PAM4 449 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FAM72CH0Y354 149 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 EPN2O95208 641 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MOCS3O95396 460 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 GPD1P21695 349 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CASP14P31944 242 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PTPN9P43378 593 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 STK19P49842 368 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PLK1P53350 603 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CDH4P55283 916 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 HDAC4P56524 1084 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms