RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PPTC7Q8NI37 304 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 RXFP2Q8WXD0 754 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 TBCBQ99426 244 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 SLC2A11Q9BYW1 496 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 PLEKHA5Q9HAU0 1116 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 UBAP1Q9NZ09 502 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 RIMS3Q9UJD0 308 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 AKT3Q9Y243 479 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 WDR37Q9Y2I8 494 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 CDY2AQ9Y6F7 541 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 CDY1Q9Y6F8 540 aa10.96□□□□□ -0.65
MTHFD1-210ENST00000555252 RBM47A0AV96 593 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 BCLAF3A2AJT9 711 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC15A5A6NIM6 579 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 PDE5AO76074 875 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 GSRP00390 522 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 THRAP10827 490 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 PDGFRAP16234 1089 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF23P17027 643 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 ARF4P18085 180 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 CDH2P19022 906 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 CD97P48960 835 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 CDK9P50750 372 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 NDST1P52848 882 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 TUBA4AP68366 448 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 IGBP1P78318 339 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 PPIDQ08752 370 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 LPIN1Q14693 890 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 DCAF4L1Q3SXM0 396 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 ARMCX2Q7L311 632 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 HPS6Q86YV9 775 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 ZDHHC17Q8IUH5 632 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 TFB1MQ8WVM0 346 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF668Q96K58 619 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 CNDP1Q96KN2 507 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 RNF157Q96PX1 679 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 EBNA1BP2Q99848 306 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 MRPL1Q9BYD6 325 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 GRIP2Q9C0E4 1043 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 DNAI2Q9GZS0 605 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 GBA2Q9HCG7 927 aaPredicted RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 RHBDL2Q9NX52 303 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 HACD3Q9P035 362 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 HMGXB4Q9UGU5 601 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 RSL24D1Q9UHA3 163 aaKnown RBP10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 CEPT1Q9Y6K0 416 aa10.96□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF701M0R085 212 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF195O14628 629 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 PLIN3O60664 434 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 ATP6V1G1O75348 118 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 H2AFYO75367 372 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 CAPN15O75808 1086 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 STK10O94804 968 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 HNRNPCP07910 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 CSH1P0DML2 217 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 CSH2P0DML3 217 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 GRM5P41594 1212 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 NUP107P57740 925 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 CCNA1P78396 465 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 ORC1Q13415 861 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 DPYSQ14117 519 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 STEAP4Q687X5 459 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 UNC5AQ6ZN44 842 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 FRMD7Q6ZUT3 714 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 CAND1Q86VP6 1230 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 POU5F2Q8N7G0 328 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 CCDC124Q96CT7 223 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 DNAJC1Q96KC8 554 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 R3HDMLQ9H3Y0 253 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 PLGRKTQ9HBL7 147 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 PCDH18Q9HCL0 1135 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 PDGFCQ9NRA1 345 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 SMYD2Q9NRG4 433 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 RAB6BQ9NRW1 208 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 TSPAN16Q9UKR8 245 aa10.95□□□□□ -0.66
MTHFD1-210ENST00000555252 SH3PXD2BA1X283 911 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 HMX2A2RU54 273 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 H7C0C1 242 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TSPAN1O60635 241 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 CBFA2T3O75081 653 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ALDH1A2O94788 518 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 SLC5A2P31639 672 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ATP5OP48047 213 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ALDH3B2P48448 385 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ERFP50548 548 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 ABCE1P61221 599 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PHEXP78562 749 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 CDC42EP1Q00587 391 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 KLF10Q13118 480 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 PCLAFQ15004 111 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 TCHHL1Q5QJ38 904 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 FAM183BPQ6ZVS7 135 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 DEPDC1BQ8WUY9 529 aa10.94□□□□□ -0.66
MTHFD1-210ENST00000555252 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms