RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CDC25CP30307 473 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 GJC1P36383 396 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 ARSEP51690 589 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 OGDHQ02218 1023 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 DAB2IPQ5VWQ8 1189 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 TXNDC8Q6A555 127 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 BBS12Q6ZW61 710 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 CKAP2Q8WWK9 683 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 CYLDQ9NQC7 956 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 NAALADL1Q9UQQ1 740 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 LRRD1A4D1F6 860 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 BMP1P13497 986 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 KRT10P13645 584 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 BRAFP15056 766 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 DAOAP59103 153 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 ATP13A4Q4VNC1 1196 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 SNX30Q5VWJ9 437 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 HFE2Q6ZVN8 426 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 CENPUQ71F23 418 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 GBP7Q8N8V2 638 aaPredicted RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 ST13P5Q8NFI4 369 aaPredicted RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 PHF7Q9BWX1 381 aaPredicted RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 SLC46A2Q9BY10 475 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 CNGB3Q9NQW8 809 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 NKIRAS1Q9NYS0 192 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 A0A1W2PQH9 124 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 C3orf70A6NLC5 250 aaPredicted RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 PI4K2BG5E9Z4 385 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 ZNF197O14709 1029 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 DNAJC8O75937 253 aaPredicted RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 GJB6O95452 261 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 TSHRP16473 764 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 VPS41P49754 854 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 MRPS5P82675 430 aaKnown RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 PUS10Q3MIT2 529 aaKnown RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 RNASEH2BQ5TBB1 312 aaKnown RBP17.9■□□□□ 0.46
SHOX-204ENST00000554971 KAZNQ674X7 775 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 SIX6OS1Q8N1H7 587 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 SCML4Q8N228 414 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 OVCA2Q8WZ82 227 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 ASB2Q96Q27 587 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHOX-204ENST00000554971 SLC24A2Q9UI40 661 aa17.9■□□□□ 0.46
SHOX-204ENST00000554971 C2CD4DB7Z1M9 353 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 SNX3O60493 162 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 OAS1P00973 400 aaKnown RBP17.89■□□□□ 0.45
SHOX-204ENST00000554971 RFC1P35251 1148 aaPredicted RBP17.89■□□□□ 0.45
SHOX-204ENST00000554971 PCK1P35558 622 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 SLC25A11Q02978 314 aaKnown RBP17.89■□□□□ 0.45
SHOX-204ENST00000554971 GPS1Q13098 491 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 TAF5Q15542 800 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 MON1AQ86VX9 555 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 MAB21L3Q8N8X9 362 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 MAML1Q92585 1016 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 MCRS1Q96EZ8 462 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 CYP2S1Q96SQ9 504 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 RNF38Q9H0F5 515 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 CCSER2Q9H7U1 834 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 TRPM5Q9NZQ8 1165 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
SHOX-204ENST00000554971 FGF19O95750 216 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 FYNP06241 537 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 LAMP2P13473 410 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 HNRNPH1P31943 449 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 ACADSBP45954 432 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 ZXDBP98169 803 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 AAK1Q2M2I8 961 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 ZC3H12AQ5D1E8 599 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 GPR158Q5T848 1215 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 OLFML1Q6UWY5 402 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 FAM183BPQ6ZVS7 135 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 XYLT1Q86Y38 959 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 KHSRPQ92945 711 aaKnown RBP eCLIP17.88■□□□□ 0.45
SHOX-204ENST00000554971 MAGEB18Q96M61 343 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 NCAPGQ9BPX3 1015 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 SAYSD1Q9NPB0 183 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 KCNK9Q9NPC2 374 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 LRCH4O75427 683 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 RASSF9O75901 435 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 RNF8O76064 485 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 SUN1O94901 812 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 TBX18O95935 607 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 KDELR1P24390 212 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 SCTRP47872 440 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 CBLBQ13191 982 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 XRCC4Q13426 336 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 CCDC38Q502W7 563 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 PDZD8Q8NEN9 1154 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 MRPS31Q92665 395 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 C9orf72Q96LT7 481 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 ELAC2Q9BQ52 826 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 SMG9Q9H0W8 520 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 TLR8Q9NR97 1041 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.88■□□□□ 0.45
SHOX-204ENST00000554971 ASNSD1Q9NWL6 643 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 GDE1Q9NZC3 331 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 NUDT5Q9UKK9 219 aa17.88■□□□□ 0.45
SHOX-204ENST00000554971 SMG5Q9UPR3 1016 aaKnown RBP17.88■□□□□ 0.45
SHOX-204ENST00000554971 F5P12259 2224 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms