RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 PTPRZ1P23471 2315 aaPredicted RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 DRGXA6NNA5 263 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 GJB6O95452 261 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 FTLP02792 175 aaPredicted RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 SRPRAP08240 638 aaKnown RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 SKILP12757 684 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 RRM1P23921 792 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 PRKCHP24723 683 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 ADRA1BP35368 520 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 NNMTP40261 264 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 ZNF143P52747 638 aaPredicted RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 PLK1P53350 603 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 ECT2LQ008S8 904 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 SPEM2Q0P670 501 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 C15orf59Q2T9L4 293 aaPredicted RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 MAP7D1Q3KQU3 841 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 PLEKHG6Q3KR16 790 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 SLC36A4Q6YBV0 504 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 LPCAT2Q7L5N7 544 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 METTL3Q86U44 580 aaKnown RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
APEX1-208ENST00000554813 TMPRSS6Q8IU80 811 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 KDM1BQ8NB78 822 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 ANLNQ9NQW6 1124 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 TAS2R14Q9NYV8 317 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 ERVW-1Q9UQF0 538 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 PCDHGA5Q9Y5G8 931 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 ITIH6Q6UXX5 1313 aa13.64□□□□□ -0.23
APEX1-208ENST00000554813 TCRBV5S1A1TA0A578 114 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 E9PAM4 449 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 I6L893 689 aaPredicted RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 FOXD2O60548 495 aaPredicted RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 SRGAP2O75044 1071 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 RTN2O75298 545 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 EPN2O95208 641 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 SERPING1P05155 500 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 ACADMP11310 421 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 HLA-EP13747 358 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 GGCXP38435 758 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 CAMK2GQ13555 558 aaPredicted RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 E4F1Q66K89 784 aaPredicted RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 PMS2CLQ68D20 193 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 KIAA1324Q6UXG2 1013 aaKnown RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 APCDD1Q8J025 514 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 RNF214Q8ND24 703 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 FAM172AQ8WUF8 416 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 PRCCQ92733 491 aaPredicted RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 SIPA1Q96FS4 1042 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 MCEEQ96PE7 176 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 CNPY3Q9BT09 278 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.63□□□□□ -0.23
APEX1-208ENST00000554813 MKRN2Q9H000 416 aaKnown RBP13.63□□□□□ -0.23
APEX1-208ENST00000554813 ARRDC1-AS1Q9H2J1 176 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 FBRSQ9HAH7 460 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 TMPRSS4Q9NRS4 437 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 TBC1D30Q9Y2I9 924 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 FAM186AA6NE01 2351 aa13.63□□□□□ -0.23
APEX1-208ENST00000554813 EML5Q05BV3 1969 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 IGLV3-10A0A075B6K4 115 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 DDX3XO00571 662 aaKnown RBP eCLIP13.62□□□□□ -0.233e-15■■□□□ 13.4
APEX1-208ENST00000554813 AP5Z1O43299 807 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 BCKDHBP21953 392 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 MZF1P28698 734 aaPredicted RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 HDAC4P56524 1084 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 RPL7AP62424 266 aaKnown RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 MAMLD1Q13495 774 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 CSRP2Q16527 193 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 TDRD12Q587J7 1177 aaKnown RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 PPP1R15BQ5SWA1 713 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 SPECC1LQ69YQ0 1117 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 PLEKHA7Q6IQ23 1121 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 CXorf57Q6NSI4 855 aaKnown RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 SETD3Q86TU7 594 aaPredicted RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 FRMD1Q8N878 549 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 TRIM11Q96F44 468 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 MUC3BQ9H195 1237 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 OSBPL2Q9H1P3 480 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 SLC6A17Q9H1V8 727 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 RETREG1Q9H6L5 497 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 PRSS16Q9NQE7 514 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 ITM2CQ9NQX7 267 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 SEMA4GQ9NTN9 838 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 PPARGC1AQ9UBK2 798 aaKnown RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 OR12D3Q9UGF7 316 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
APEX1-208ENST00000554813 MBD1Q9UIS9 605 aaPredicted RBP13.62□□□□□ -0.23
APEX1-208ENST00000554813 CYP8B1Q9UNU6 501 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms