RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TNS2Q63HR2 1409 aa1.74□□□□□ -2.13
PRPF39-208ENST00000554785 CDC42BPGQ6DT37 1551 aa1.74□□□□□ -2.13
PRPF39-208ENST00000554785 FMN2Q9NZ56 1722 aa1.74□□□□□ -2.13
PRPF39-208ENST00000554785 RPRD2Q5VT52 1461 aaKnown RBP1.74□□□□□ -2.13
PRPF39-208ENST00000554785 KIAA0232Q92628 1395 aa1.74□□□□□ -2.13
PRPF39-208ENST00000554785 NEXMIFQ5QGS0 1516 aa1.74□□□□□ -2.13
PRPF39-208ENST00000554785 KIF1AQ12756 1690 aa1.74□□□□□ -2.13
PRPF39-208ENST00000554785 CCDC144AA2RUR9 1427 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 GCOM1H8Y6P7 765 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SMIM22K7EJ46 135 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 QSOX1O00391 747 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 IPO5O00410 1097 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ABCC5O15440 1437 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 TJP3O95049 919 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MYCLP12524 364 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 HSD3B1P14060 373 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 DRD1P21728 446 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ADRA1DP25100 572 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 AKT1P31749 480 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PRELPP51888 382 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 DGKQP52824 942 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PNLIPRP1P54315 467 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SOX10P56693 466 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 AP2B1P63010 937 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CYP4F2P78329 520 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 NAIPQ13075 1403 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PPFIA1Q13136 1202 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SEMA3BQ13214 749 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 KCNJ12Q14500 433 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 TAF5Q15542 800 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 FAM153CQ494X1 144 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 AASDHQ4L235 1098 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MTX3Q5HYI7 312 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PCID2Q5JVF3 399 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 L1TD1Q5T7N2 865 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 DENND2CQ68D51 928 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CCDC144NLQ6NUI1 221 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ANKRD16Q6P6B7 361 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 RFX8Q6ZV50 586 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PTCHD4Q6ZW05 846 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SMIM5Q71RC9 77 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 P3H2Q8IVL5 708 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SLC44A2Q8IWA5 706 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ABHD11Q8NFV4 315 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SCAMP5Q8TAC9 235 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 OVCA2Q8WZ82 227 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 LENG8Q96PV6 779 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 EIF3CQ99613 913 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MLXIPQ9HAP2 919 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PRDM8Q9NQV8 689 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ITM2CQ9NQX7 267 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 DUSP22Q9NRW4 184 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SH3BP4Q9P0V3 963 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 LPAR3Q9UBY5 353 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.73□□□□□ -2.133e-10■■■■□ 19.3
PRPF39-208ENST00000554785 KIAA1210Q9ULL0 1709 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ADAMTS5Q9UNA0 930 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 GPR52Q9Y2T5 361 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CRYBG1Q9Y4K1 1723 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 NCOA3Q9Y6Q9 1424 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 N4BP2Q86UW6 1770 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SPATA31A5Q5VU36 1347 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SPATA31A7Q8IWB4 1347 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PRUNE2Q8WUY3 3088 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MYOM3Q5VTT5 1437 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ANKRD50Q9ULJ7 1429 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 LAMA2P24043 3122 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CCDC189A1A4V9 331 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 HMX3A6NHT5 357 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 NPHP1O15259 732 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 IRAK2O43187 625 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CTIFO43310 598 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 KCNAB3O43448 404 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CA12O43570 354 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 TMPRSS11DO60235 418 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PDE8BO95263 885 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CER1O95813 267 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 FGAP02671 866 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 NPSP0C0P6 89 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 HSPA1AP0DMV8 641 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 HSPA1BP0DMV9 641 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CYP2D6P10635 497 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MMP8P22894 467 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 CST5P28325 142 aaPredicted RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MCM5P33992 734 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 DIO1P49895 249 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 EEFSECP57772 596 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 TXNL4AP83876 142 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 DEUP1Q05D60 604 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 BFSP2Q13515 415 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 ETFDHQ16134 617 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 SRSF7Q16629 238 aaKnown RBP eCLIP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 BTBD16Q32M84 506 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 TRIM60Q495X7 471 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 AARS2Q5JTZ9 985 aaKnown RBP1.73□□□□□ -2.13
PRPF39-208ENST00000554785 PRAMEF17Q5VTA0 474 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 FAM90A2PQ658T7 463 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 GRHL2Q6ISB3 625 aa1.73□□□□□ -2.13
PRPF39-208ENST00000554785 MSANTD2Q6P1R3 559 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms