RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 PITRM1Q5JRX3 1037 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 RNF219Q5W0B1 726 aaPredicted RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 DHRS13Q6UX07 377 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 MMAAQ8IVH4 418 aaKnown RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 FMR1NBQ8N0W7 255 aaPredicted RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 CFAP52Q8N1V2 620 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 KAT5Q92993 513 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 SMARCE1Q969G3 411 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 MYEOVQ96EZ4 313 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 SLC39A13Q96H72 371 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 LRIG1Q96JA1 1093 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 AASDHPPTQ9NRN7 309 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 GOLGA6L4A6NEF3 574 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 E9PAM4 449 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 YKT6O15498 198 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 CALCAP01258 141 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 APOEP02649 317 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 FYNP06241 537 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 ITGAVP06756 1048 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 GOT1P17174 413 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 ABCB4P21439 1286 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 CD38P28907 300 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 CTSOP43234 321 aaPredicted RBP12.91□□□□□ -0.34
RDH11-207ENST00000554731 PSMD8P48556 350 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 CCR5P51681 352 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 KCNJ12Q14500 433 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 PRAMEF14Q5SWL7 426 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 SND1Q7KZF4 910 aaKnown RBP eCLIP12.91□□□□□ -0.343e-7■■■■■ 29.8
RDH11-207ENST00000554731 TMPRSS12Q86WS5 348 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 GATAD2AQ86YP4 633 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 SCUBE3Q8IX30 993 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 LGI2Q8N0V4 545 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 SPATA20Q8TB22 786 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 ADAM32Q8TC27 787 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 CEP63Q96MT8 703 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 TRIM62Q9BVG3 475 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 EBF2Q9HAK2 575 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 GDF3Q9NR23 364 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 HOOK1Q9UJC3 728 aaKnown RBP12.91□□□□□ -0.34
RDH11-207ENST00000554731 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
RDH11-207ENST00000554731 NAALADL1Q9UQQ1 740 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 LAMA5O15230 3695 aa12.91□□□□□ -0.34
RDH11-207ENST00000554731 NBEAQ8NFP9 2946 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 IGSF10Q6WRI0 2623 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 ENC1O14682 589 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 CAPN9O14815 690 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 P4HA2O15460 535 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 LDOC1O95751 146 aaPredicted RBP12.9□□□□□ -0.34
RDH11-207ENST00000554731 ADH1BP00325 375 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 WNT1P04628 370 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 CDK4P11802 303 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 C5AR1P21730 350 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 HNF1BP35680 557 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 ACADSBP45954 432 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 RPL34P49207 117 aaKnown RBP12.9□□□□□ -0.34
RDH11-207ENST00000554731 NUCB2P80303 420 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 GCNT1Q02742 428 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 BEND5Q7L4P6 421 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 RRAGAQ7L523 313 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 TAC4Q86UU9 113 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 CHSY1Q86X52 802 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 STK40Q8N2I9 435 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 OR14C36Q8NHC7 312 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 LMO3Q8TAP4 145 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 ERCC4Q92889 916 aaPredicted RBP12.9□□□□□ -0.34
RDH11-207ENST00000554731 DHTKD1Q96HY7 919 aaPredicted RBP12.9□□□□□ -0.34
RDH11-207ENST00000554731 SERAC1Q96JX3 654 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 CNDP2Q96KP4 475 aaKnown RBP12.9□□□□□ -0.34
RDH11-207ENST00000554731 FAM129BQ96TA1 746 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
RDH11-207ENST00000554731 SLCO3A1Q9UIG8 710 aa12.9□□□□□ -0.34
RDH11-207ENST00000554731 A0A087WV48 116 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 A0A1W2PR77 199 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 C10orf142B7Z368 130 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 C1SP09871 688 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 JUPP14923 745 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 TACR2P21452 398 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 NNMTP40261 264 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 PPP1R2P41236 205 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 GPD2P43304 727 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 ARRB1P49407 418 aaPredicted RBP12.89□□□□□ -0.35
RDH11-207ENST00000554731 ADPRHP54922 357 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
RDH11-207ENST00000554731 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
RDH11-207ENST00000554731 SYPL2Q5VXT5 272 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 RAP1GAP2Q684P5 730 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 APCDD1Q8J025 514 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 AADATQ8N5Z0 425 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 SAP25Q8TEE9 199 aa12.89□□□□□ -0.35
RDH11-207ENST00000554731 NXPE2Q96DL1 559 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms