RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 DPP10Q8N608 796 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RHEBL1Q8TAI7 183 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 C11orf24Q96F05 449 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PIWIL1Q96J94 861 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CEP170P1Q96L14 293 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 FCRL3Q96P31 734 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 MSTO1Q9BUK6 570 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SNRNP25Q9BV90 132 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SENP6Q9GZR1 1112 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 R3HDMLQ9H3Y0 253 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NOL6Q9H6R4 1146 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TXNRD2Q9NNW7 524 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ENAMQ9NRM1 1142 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 FKBP14Q9NWM8 211 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NDUFA13Q9P0J0 144 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PDP2Q9P2J9 529 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 VTI1BQ9UEU0 232 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 LRRD1A4D1F6 860 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 IQCA1LA6NCM1 817 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SOBPA7XYQ1 873 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 A8MVJ9 347 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PTGESO14684 152 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 MTSS1O43312 755 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TBX10O75333 385 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 VNN2O95498 520 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 LATS1O95835 1130 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 LGALS2P05162 132 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SNRPAP09012 282 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TYMPP19971 482 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TARSP26639 723 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NOS2P35228 1153 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TCF7P36402 384 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PTDSS1P48651 473 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 GMPSP49915 693 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RASSF2P50749 326 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CDR1P51861 262 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF200P98182 395 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CALCOCO2Q13137 446 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 IHHQ14623 411 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PPP2R5DQ14738 602 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ATP13A4Q4VNC1 1196 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 DALRD3Q5D0E6 543 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 MLIPQ5VWP3 458 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 KANK2Q63ZY3 851 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 KIAA0930Q6ICG6 404 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 PMF1Q6P1K2 205 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RFWD3Q6PCD5 774 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 RANBP10Q6VN20 620 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ERO1BQ86YB8 467 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM192Q8IY95 271 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CENPLQ8N0S6 344 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CBARPQ8N350 705 aaPredicted RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 KDM1BQ8NB78 822 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TRPM4Q8TD43 1214 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CHTF18Q8WVB6 975 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 WDR60Q8WVS4 1066 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 OVCA2Q8WZ82 227 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SPATA17Q96L03 361 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 UROC1Q96N76 676 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SCLT1Q96NL6 688 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 MCEEQ96PE7 176 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SYT15Q9BQS2 421 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD60Q9BZ19 345 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CDH19Q9H159 772 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SMOC2Q9H3U7 446 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 SMYD3Q9H7B4 428 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ADARB2Q9NS39 739 aaKnown RBP3.54□□□□□ -1.84
SEC23A-207ENST00000554615 GGA3Q9NZ52 723 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 ZFATQ9P243 1243 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 STK39Q9UEW8 545 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 TLK1Q9UKI8 766 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 MED16Q9Y2X0 877 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 CKAP5Q14008 2032 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 NUP205Q92621 2012 aa3.54□□□□□ -1.84
SEC23A-207ENST00000554615 H3BNC9 293 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD28O15084 1053 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ACOX3O15254 700 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 GREM1O60565 184 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SERPINE1P05121 402 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 STAG3L1P0CL83 205 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ETS1P14921 441 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ARF4P18085 180 aaPredicted RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 WEE1P30291 646 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DPP6P42658 865 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SCNN1GP51170 649 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 STAT5BP51692 787 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 BCAT1P54687 386 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CA9Q16790 459 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 TAF1BQ53T94 588 aaPredicted RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RALGPS1Q5JS13 557 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SNRNP48Q6IEG0 339 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 LCN8Q6JVE9 175 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZFP1Q6P2D0 407 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC174Q6PII3 467 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 LVRNQ6Q4G3 990 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 C19orf48Q6RUI8 117 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 POTEAQ6S8J7 498 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KIAA0907Q7Z7F0 614 aaPredicted RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SRPK1Q96SB4 655 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms