RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF623O75123 536 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FGF18O76093 207 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RTN3O95197 1032 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 OR5F1O95221 314 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 LRG1P02750 347 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 JMJD7P0C870 316 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 GHRP10912 638 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 HNRNPLP14866 589 aaKnown RBP eCLIP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 JUPP14923 745 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ACAT1P24752 427 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PEX2P28328 305 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CD52P31358 61 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ADCY8P40145 1251 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RECQLP46063 649 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NDUFV1P49821 464 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SCNN1GP51170 649 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CASP5P51878 434 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ITGA8P53708 1063 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TRA2BP62995 288 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SNRPNP63162 240 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RPP30P78346 268 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ARID5BQ14865 1188 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ERCC6LQ2NKX8 1250 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 KLHL40Q2TBA0 621 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 KCTD21Q4G0X4 260 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 RRAGBQ5VZM2 374 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FAM160B1Q5W0V3 765 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CWF19L1Q69YN2 538 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 FCRLBQ6BAA4 426 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DRICH1Q6PGQ1 229 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 AGMOQ6ZNB7 445 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 C15orf39Q6ZRI6 1047 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 LRRC55Q6ZSA7 311 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MRPL10Q7Z7H8 261 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 DDX53Q86TM3 631 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SPATA24Q86W54 205 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NUDT13Q86X67 352 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 GRAMD1CQ8IYS0 662 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 KIAA0319LQ8IZA0 1049 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CARFQ8N187 725 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NXPE1Q8N323 547 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MRPL43Q8N983 215 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 BANPQ8N9N5 519 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 C3orf58Q8NDZ4 430 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NCOA7Q8NI08 942 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CHTF18Q8WVB6 975 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 BTN2A2Q8WVV5 523 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM40Q8WWA1 233 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 EDEM1Q92611 657 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CDKL2Q92772 493 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SGK3Q96BR1 496 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ITPKCQ96DU7 683 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF764Q96H86 408 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TMX3Q96JJ7 454 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ZC3H10Q96K80 434 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 IFT74Q96LB3 600 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC74BQ96LY2 380 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NLRP4Q96MN2 994 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SMC6Q96SB8 1091 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TCF25Q9BQ70 676 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SPATA9Q9BWV2 254 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 LGR4Q9BXB1 951 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 OSBPL6Q9BZF3 934 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM4Q9C037 500 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ZBP1Q9H171 429 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PSTPIP2Q9H939 334 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TM9SF3Q9HD45 589 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 JPH1Q9HDC5 661 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SLC2A4RGQ9NR83 387 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 AGPAT3Q9NRZ7 376 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 MOCS1Q9NZB8 636 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 SLC9A2Q9UBY0 812 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 TRPS1Q9UHF7 1281 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 ANGPTL2Q9UKU9 493 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PYCARDQ9ULZ3 195 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 GIT1Q9Y2X7 761 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 NAALAD2Q9Y3Q0 740 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 CHTOPQ9Y3Y2 248 aaKnown RBP2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHB7Q9Y5E2 793 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHGA11Q9Y5H2 935 aa2.81□□□□□ -1.96
PRPF39-206ENST00000554429 REV3LO60673 3130 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 A0A087X0M5 115 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 A0A0B4J269 797 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 A0A1B0GX30 115 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 E7EVH7 732 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 E7EWF7 191 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ANHXE9PGG2 379 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 YKT6O15498 198 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TTI1O43156 1089 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TSPAN3O60637 253 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ATP9AO75110 1047 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 H2AFYO75367 372 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 BCAS2O75934 225 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM16O95361 564 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PLATP00750 562 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SOD2P04179 222 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 S100A9P06702 114 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 WEE2P0C1S8 567 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CTSAP10619 480 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 UBL4AP11441 157 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms