RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 KCNK3O14649 394 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 TNFSF14O43557 240 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 RNASEH1O60930 286 aaKnown RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 LATS1O95835 1130 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 SETSIPP0DME0 302 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 VDRP11473 427 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 TBXAS1P24557 533 aaPredicted RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 CD27P26842 260 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CD70P32970 193 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 SGSHP51688 502 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 RPS14P62263 151 aaKnown RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 ZBTB16Q05516 673 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CDH18Q13634 790 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 TUBB2AQ13885 445 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 PTPRNQ16849 979 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 DPCR1Q3MIW9 517 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CBWD6Q4V339 395 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 ZCWPW2Q504Y3 356 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CBWD3Q5JTY5 395 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CBWD5Q5RIA9 395 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 NUGGCQ68CJ6 796 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 RFWD3Q6PCD5 774 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 TMPRSS7Q7RTY8 843 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 ADIPOR2Q86V24 386 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 MARCH9Q86YJ5 346 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CARNMT1Q8N4J0 409 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 ZNF557Q8N988 423 aaPredicted RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 BAHD1Q8TBE0 780 aaPredicted RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 SMARCE1Q969G3 411 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 IGSF8Q969P0 613 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 SKA1Q96BD8 255 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 TUBB2BQ9BVA1 445 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 ACE2Q9BYF1 805 aaPredicted RBP9.17□□□□□ -0.94
TDP1-208ENST00000553989 SGK2Q9HBY8 427 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 PRSS16Q9NQE7 514 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 CNGB3Q9NQW8 809 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 FTSJ1Q9UET6 329 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 SUN2Q9UH99 717 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 ZFYVE26Q68DK2 2539 aa9.17□□□□□ -0.94
TDP1-208ENST00000553989 SPEGQ15772 3267 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 GOLGA6L7A0A1B0GV03 622 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 H0Y8X5 98 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 O00370 1275 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 SLC16A3O15427 465 aaKnown RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 IRAK2O43187 625 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 RNASEH2AO75792 299 aaKnown RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 MOCS2O96007 188 aaPredicted RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 ABCB4P21439 1286 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 TBX4P57082 545 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 DAOAP59103 153 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 CYP4F3Q08477 520 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 PIK3R6Q5UE93 754 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 RNF219Q5W0B1 726 aaPredicted RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 KIAA0895LQ68EN5 471 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 TMEM270Q6UE05 265 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 BHLHA9Q7RTU4 235 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 VSTM4Q8IW00 320 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.16□□□□□ -0.94
TDP1-208ENST00000553989 HJURPQ8NCD3 748 aaPredicted RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 ZNF397Q8NF99 534 aaPredicted RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 WFDC5Q8TCV5 224 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 KCTD13Q8WZ19 329 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 ZNF592Q92610 1267 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 LRIG1Q96JA1 1093 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 OMDQ99983 421 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 DDX50Q9BQ39 737 aaKnown RBP9.16□□□□□ -0.94
TDP1-208ENST00000553989 MIS12Q9H081 205 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 MTG2Q9H4K7 406 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 L2HGDHQ9H9P8 463 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 AASDHPPTQ9NRN7 309 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 TOR4AQ9NXH8 423 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 FBXL12Q9NXK8 326 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 STOML2Q9UJZ1 356 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 PCDHB4Q9Y5E5 795 aa9.16□□□□□ -0.94
TDP1-208ENST00000553989 BAHCC1Q9P281 2608 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 A0A1W2PP55 124 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 TRABD2BA6NFA1 517 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 LRRC72A6NJI9 287 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 BIN1O00499 593 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ARHGAP6O43182 974 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ATP8B1O43520 1251 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 PCDHGA12O60330 932 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 DFNA5O60443 496 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ACSL4O60488 711 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 MOCS3O95396 460 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 LTFP02788 710 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 CAPNS1P04632 268 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ITGAVP06756 1048 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 SLC6A4P31645 630 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 CSKP41240 450 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 PSMD8P48556 350 aa9.15□□□□□ -0.94
TDP1-208ENST00000553989 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 RACK1P63244 317 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.94
TDP1-208ENST00000553989 PNOCQ13519 176 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms