RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
TUBB3-203ENST00000553967 PKD1L2Q7Z442 2459 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 EDDM13A0A1B0GTR0 161 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 TARSL2A2RTX5 802 aaKnown RBP16.33■□□□□ 0.2
TUBB3-203ENST00000553967 KCNK3O14649 394 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 MID1O15344 667 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 IGLV3-25P01717 112 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 CAPNS1P04632 268 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 IGHV4-34P06331 123 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 TACR2P21452 398 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 GALCP54803 685 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 ECT2LQ008S8 904 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 SCAPQ12770 1279 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 PDCLQ13371 301 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 CST6Q15828 149 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 KCNT1Q5JUK3 1230 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 GJB7Q6PEY0 223 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 TRIM65Q6PJ69 517 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 CCNI2Q6ZMN8 369 aaPredicted RBP16.33■□□□□ 0.2
TUBB3-203ENST00000553967 ADAT2Q7Z6V5 191 aaKnown RBP16.33■□□□□ 0.2
TUBB3-203ENST00000553967 CHSY1Q86X52 802 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 MMAAQ8IVH4 418 aaKnown RBP16.33■□□□□ 0.2
TUBB3-203ENST00000553967 APCDD1Q8J025 514 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 IGSF8Q969P0 613 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 CRACR2AQ9BSW2 395 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 NEUROG2Q9H2A3 272 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 SLCO3A1Q9UIG8 710 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 BTBD3Q9Y2F9 522 aa16.33■□□□□ 0.2
TUBB3-203ENST00000553967 A0A1W2PP55 124 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 KCNU1A8MYU2 1149 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 F5H5T6 163 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 H0Y8X5 98 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 TAF4O00268 1085 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 RNASEH2AO75792 299 aaKnown RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 ATXN1LP0C7T5 689 aaKnown RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 DSPP15924 2871 aaKnown RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 SLC8A1P32418 973 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 USP8P40818 1118 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 CTSKP43235 329 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 RACK1P63244 317 aaKnown RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 PITX1P78337 314 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 EIF4EBP2Q13542 120 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 TAF5Q15542 800 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 RNF219Q5W0B1 726 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 NCEH1Q6PIU2 408 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 PROSER1Q86XN7 944 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 CREBRFQ8IUR6 639 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 ATP6V0D2Q8N8Y2 350 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 TMEM131Q92545 1883 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 RPL10LQ96L21 214 aaKnown RBP16.32■□□□□ 0.2
TUBB3-203ENST00000553967 FAM81BQ96LP2 452 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 OMDQ99983 421 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.24e-7■■■□□ 18.7
TUBB3-203ENST00000553967 TOR4AQ9NXH8 423 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 SLC12A6Q9UHW9 1150 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 FZD4Q9ULV1 537 aa16.32■□□□□ 0.2
TUBB3-203ENST00000553967 PLXNB3Q9ULL4 1909 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 A0A1W2PPC4 97 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 LRRC72A6NJI9 287 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 BECN2A8MW95 431 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 SLC9A1P19634 815 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 GRK6P43250 576 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 CCT8P50990 548 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 C21orf59P57076 290 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 CDK17Q00537 523 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 ARHGAP44Q17R89 818 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 STK40Q8N2I9 435 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 OR2T34Q8NGX1 318 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 FAM129BQ96TA1 746 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 PRMT1Q99873 361 aaKnown RBP16.31■□□□□ 0.2
TUBB3-203ENST00000553967 ACE2Q9BYF1 805 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-203ENST00000553967 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 RWDD2AQ9UIY3 292 aa16.31■□□□□ 0.2
TUBB3-203ENST00000553967 PTPRBP23467 1997 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 GOLGA8CPA6NN73 597 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 VILLO15195 856 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 DFNA5O60443 496 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 DKK1O94907 266 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 GLI1P08151 1106 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 SLC2A3P11169 496 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 PDGFRAP16234 1089 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 GOT1P17174 413 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 ABCB4P21439 1286 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 NNMTP40261 264 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 PSMD8P48556 350 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 NUMBP49757 651 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 STK19P49842 368 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-203ENST00000553967 APBA1Q02410 837 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 TTC39BQ5VTQ0 682 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-203ENST00000553967 GBP6Q6ZN66 633 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 TMPRSS7Q7RTY8 843 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 CIR1Q86X95 450 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-203ENST00000553967 CCAR2Q8N163 923 aaKnown RBP16.3■□□□□ 0.2
TUBB3-203ENST00000553967 WDTC1Q8N5D0 677 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
TUBB3-203ENST00000553967 RNF34Q969K3 372 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms