RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PANK2Q9BZ23 570 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 CYP3A43Q9HB55 503 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 THSD1Q9NS62 852 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
PRKCH-208ENST00000553846 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 PCDHGA8Q9Y5G5 932 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TDRD6O60522 2096 aaKnown RBP9.42□□□□□ -0.9
PRKCH-208ENST00000553846 LRBAP50851 2863 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 SCN8AQ9UQD0 1980 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TARSL2A2RTX5 802 aaKnown RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 MSI1O43347 362 aaKnown RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 PLRG1O43660 514 aaKnown RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 GABBR2O75899 941 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 PIAS2O75928 621 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 HLA-DRAP01903 254 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 ASLP04424 464 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 POLR2EP19388 210 aaKnown RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 C5AR1P21730 350 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 MZF1P28698 734 aaPredicted RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 PSMD8P48556 350 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 TAS2R38P59533 333 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 MCCD1P59942 119 aaPredicted RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 NFKB2Q00653 900 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 NFATC3Q12968 1075 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 KNOP1Q1ED39 458 aaKnown RBP9.41□□□□□ -0.9
PRKCH-208ENST00000553846 FSCBQ5H9T9 825 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 AGBL4Q5VU57 503 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 ARHGAP17Q68EM7 881 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 RFWD3Q6PCD5 774 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 SLC22A18ASQ8N1D0 253 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 PDILTQ8N807 584 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 TAS1R2Q8TE23 839 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 FRS2Q8WU20 508 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 OMDQ99983 421 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 C7orf25Q9BPX7 421 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 ULBP1Q9BZM6 244 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 NIF3L1Q9GZT8 377 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 KCTD10Q9H3F6 313 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 ANKMY1Q9P2S6 941 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 SLCO3A1Q9UIG8 710 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 SATB2Q9UPW6 733 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 DMTF1Q9Y222 760 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 CA5BQ9Y2D0 317 aa9.41□□□□□ -0.9
PRKCH-208ENST00000553846 CENPEQ02224 2701 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 EDDM13A0A1B0GTR0 161 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 GOLGA6L7A0A1B0GV03 622 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 YJEFN3A6XGL0 299 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 E7ENQ6 273 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 IKBKBO14920 756 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 CASC3O15234 703 aaKnown RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 IRAK2O43187 625 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SLC7A4O43246 635 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 EXOC3O60645 756 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 TBL1XO60907 577 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 RTN2O75298 545 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ZBED1O96006 694 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ADH1BP00325 375 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 MYF5P13349 255 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 VAV1P15498 845 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 TGM2P21980 687 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 CASP1P29466 404 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 NUDT1P36639 197 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 HARS2P49590 506 aaKnown RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 RAD23BP54727 409 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 RPS24P62847 133 aaKnown RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SLC39A14Q15043 492 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SLC45A4Q5BKX6 768 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 MMS22LQ6ZRQ5 1243 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 UNC13DQ70J99 1090 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SND1Q7KZF4 910 aaKnown RBP eCLIP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 RSRC2Q7L4I2 434 aaKnown RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SCML4Q8N228 414 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 STK40Q8N2I9 435 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 OR14C36Q8NHC7 312 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 GANCQ8TET4 914 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 APOLD1Q96LR9 279 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 CUEDC2Q9H467 287 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 OLA1Q9NTK5 396 aaKnown RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 KLHL11Q9NVR0 708 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 NLGN3Q9NZ94 848 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 SARDHQ9UL12 918 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ATXN7L1Q9ULK2 861 aaPredicted RBP9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ERVW-1Q9UQF0 538 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 ENTPD2Q9Y5L3 495 aa9.4□□□□□ -0.9
PRKCH-208ENST00000553846 CSMD1Q96PZ7 3565 aa9.4□□□□□ -0.91
PRKCH-208ENST00000553846 NOBOXO60393 691 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 RNASEH1O60930 286 aaKnown RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 SRPRAP08240 638 aaKnown RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 PIK3CAP42336 1068 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 NASPP49321 788 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms