RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 ZNF677Q86XU0 584 aa18.29■□□□□ 0.52
FOXN3-204ENST00000553840 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
FOXN3-204ENST00000553840 DNASE2BQ8WZ79 361 aa18.29■□□□□ 0.52
FOXN3-204ENST00000553840 RPRD1AQ96P16 312 aaPredicted RBP18.29■□□□□ 0.52
FOXN3-204ENST00000553840 PRMT1Q99873 361 aaKnown RBP18.29■□□□□ 0.52
FOXN3-204ENST00000553840 BTBD1Q9H0C5 482 aa18.29■□□□□ 0.52
FOXN3-204ENST00000553840 MIR1-1HGQ9H1L0 117 aa18.29■□□□□ 0.52
FOXN3-204ENST00000553840 INTS6Q9UL03 887 aaKnown RBP18.29■□□□□ 0.52
FOXN3-204ENST00000553840 DAAM1Q9Y4D1 1078 aa18.29■□□□□ 0.52
FOXN3-204ENST00000553840 PCDH15Q96QU1 1955 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 LAMA1P25391 3075 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 TARSL2A2RTX5 802 aaKnown RBP18.28■□□□□ 0.52
FOXN3-204ENST00000553840 F9P00740 461 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 C7P10643 843 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 GABRB2P47870 512 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 ARID5BQ14865 1188 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 KRT31Q15323 416 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 STX1AQ16623 288 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 MMS22LQ6ZRQ5 1243 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 MINDY1Q8N5J2 469 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 ZDHHC5Q9C0B5 715 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 WDCPQ9H6R7 721 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 FANCLQ9NW38 375 aa18.28■□□□□ 0.52
FOXN3-204ENST00000553840 EDDM13A0A1B0GTR0 161 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 CDK11BP21127 795 aaKnown RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 SULT1E1P49888 294 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 AUHQ13825 339 aaKnown RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 BRMS1LQ5PSV4 323 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 ACBD5Q5T8D3 534 aaPredicted RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 FAM102AQ5T9C2 384 aaPredicted RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 FBXL22Q6P050 247 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 DHX40Q8IX18 779 aaKnown RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 GANCQ8TET4 914 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 MYO19Q96H55 970 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 MRGPRX3Q96LB0 322 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 PCMTD1Q96MG8 357 aaPredicted RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 SPAG5Q96R06 1193 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 NPY6RQ99463 290 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 RSPH9Q9H1X1 276 aaPredicted RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 SGK2Q9HBY8 427 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 FSCN3Q9NQT6 498 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 CNOT1A5YKK6 2376 aaKnown RBP18.27■□□□□ 0.52
FOXN3-204ENST00000553840 SPTBN2O15020 2390 aa18.27■□□□□ 0.52
FOXN3-204ENST00000553840 NYNRINQ9P2P1 1898 aaKnown RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 BCAT2O15382 392 aaPredicted RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 SIN3BO75182 1162 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 PAGE1O75459 146 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 SEMA4FO95754 770 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 PDGFRAP16234 1089 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ACSL1P33121 698 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 POLR2FP61218 127 aaKnown RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 MYL5Q02045 173 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 DEUP1Q05D60 604 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ZNF177Q13360 481 aaPredicted RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 USP30Q70CQ3 517 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 NOP9Q86U38 636 aaKnown RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 XYLT1Q86Y38 959 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 APCDD1Q8J025 514 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ZCCHC9Q8N567 271 aaKnown RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 SNX19Q92543 992 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 FAM207AQ9NSI2 230 aaPredicted RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 EIF2B4Q9UI10 523 aaKnown RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ANGPTL2Q9UKU9 493 aa18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ASCC3Q8N3C0 2202 aaKnown RBP18.26■□□□□ 0.51
FOXN3-204ENST00000553840 ITIH6Q6UXX5 1313 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 TTC34A8MYJ7 566 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 UPK3BL1B0FP48 263 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 UPK3BL2E5RIL1 263 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 CLDN11O75508 207 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 GFPT2O94808 682 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 MMEP08473 750 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 CTSOP43234 321 aaPredicted RBP18.25■□□□□ 0.51
FOXN3-204ENST00000553840 CXCR3P49682 368 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 PLK1P53350 603 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 ZNF252P-AS1Q0IIN9 211 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 SEMA3BQ13214 749 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 SLC14A1Q13336 389 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 SLC25A52Q3SY17 297 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 CCDC183Q5T5S1 534 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 LRRC31Q6UY01 552 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 DEFB124Q8NES8 71 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 EPS8L1Q8TE68 723 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 PGAP3Q96FM1 320 aaPredicted RBP18.25■□□□□ 0.51
FOXN3-204ENST00000553840 RPL10LQ96L21 214 aaKnown RBP18.25■□□□□ 0.51
FOXN3-204ENST00000553840 TKTL2Q9H0I9 626 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 GANQ9H2C0 597 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 PABPC3Q9H361 631 aaKnown RBP18.25■□□□□ 0.51
FOXN3-204ENST00000553840 MTG2Q9H4K7 406 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 PIGVQ9NUD9 493 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 DNAAF2Q9NVR5 837 aaKnown RBP18.25■□□□□ 0.51
FOXN3-204ENST00000553840 SLC25A13Q9UJS0 675 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 HS3ST4Q9Y661 456 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 NCOR2Q9Y618 2525 aa18.25■□□□□ 0.51
FOXN3-204ENST00000553840 GOLGA8SH3BPF8 625 aa18.24■□□□□ 0.51
FOXN3-204ENST00000553840 GIPC1O14908 333 aa18.24■□□□□ 0.51
FOXN3-204ENST00000553840 PMLP29590 882 aa18.24■□□□□ 0.51
FOXN3-204ENST00000553840 SOX5P35711 763 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms