RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ITGB6P18564 788 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 SCP2P22307 547 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 AKT1P31749 480 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 OAZ1P54368 228 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 BLMHQ13867 455 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 INPP5JQ15735 1006 aaPredicted RBP3.7□□□□□ -1.82
VRK1-202ENST00000553683 TTLL5Q6EMB2 1281 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 LVRNQ6Q4G3 990 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 KLHL17Q6TDP4 642 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 CYB5R4Q7L1T6 521 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 DDIASQ8IXT1 998 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 CACNA2D3Q8IZS8 1091 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 OTUD7AQ8TE49 926 aaPredicted RBP3.7□□□□□ -1.82
VRK1-202ENST00000553683 HMGB4Q8WW32 186 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 NLRP4Q96MN2 994 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 CRB3Q9BUF7 120 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 ZBTB40Q9NUA8 1239 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 DACT1Q9NYF0 836 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 SLC8A2Q9UPR5 921 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 LAMP3Q9UQV4 416 aa3.7□□□□□ -1.82
VRK1-202ENST00000553683 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.69□□□□□ -1.82
VRK1-202ENST00000553683 FOXO6A8MYZ6 492 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 M0QYT0 321 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 NTN1O95631 604 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 HLA-DQA2P01906 255 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 KCNJ4P48050 445 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 PGGT1BP53609 377 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 SHC2P98077 582 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 DCTN1Q14203 1278 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 SMTNL2Q2TAL5 461 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 ZNF260Q3ZCT1 412 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 C1orf228Q6PIY5 440 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 ZNF517Q6ZMY9 492 aaPredicted RBP3.69□□□□□ -1.82
VRK1-202ENST00000553683 C9orf47Q6ZRZ4 202 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 COLCA1Q6ZS62 124 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 RTL10Q7L3V2 364 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 MDGA2Q7Z553 956 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 CCDC117Q8IWD4 279 aaPredicted RBP3.69□□□□□ -1.82
VRK1-202ENST00000553683 ENAHQ8N8S7 591 aaPredicted RBP3.69□□□□□ -1.82
VRK1-202ENST00000553683 ZNF548Q8NEK5 533 aaPredicted RBP3.69□□□□□ -1.82
VRK1-202ENST00000553683 STT3BQ8TCJ2 826 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 PIGSQ96S52 555 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 MECRQ9BV79 373 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 IL21RQ9HBE5 538 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 SPAG4Q9NPE6 437 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 SLC22A11Q9NSA0 550 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 BAG5Q9UL15 447 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 DAPP1Q9UN19 280 aa3.69□□□□□ -1.82
VRK1-202ENST00000553683 TMEM247A6NEH6 219 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 CD8B2A6NJW9 211 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 B4DGG1 531 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 RHODO00212 210 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 ACKR2O00590 384 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 MDM4O15151 490 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 TNFRSF6BO95407 300 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 NFATC1O95644 943 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 CYP19A1P11511 503 aaPredicted RBP3.68□□□□□ -1.82
VRK1-202ENST00000553683 TNFRSF1BP20333 461 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 CHRNA5P30532 468 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 POLD2P49005 469 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 RASSF2P50749 326 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 RCAN1P53805 252 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 PNLIPRP1P54315 467 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 FAM3BP58499 235 aaPredicted RBP3.68□□□□□ -1.82
VRK1-202ENST00000553683 OS9Q13438 667 aaPredicted RBP3.68□□□□□ -1.82
VRK1-202ENST00000553683 SEMA3AQ14563 771 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 PLK5Q496M5 336 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 C6orf10Q5SRN2 563 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 PDXDC1Q6P996 788 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 RFX8Q6ZV50 586 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 KDELC2Q7Z4H8 507 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 IGFN1Q86VF2 1251 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 KLBQ86Z14 1044 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 FAM185AQ8N0U4 392 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 PTGR2Q8N8N7 351 aaPredicted RBP3.68□□□□□ -1.82
VRK1-202ENST00000553683 OR1N1Q8NGS0 311 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 OR6Y1Q8NGX8 325 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 LTV1Q96GA3 475 aaPredicted RBP3.68□□□□□ -1.82
VRK1-202ENST00000553683 WACQ9BTA9 647 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 FAM234AQ9H0X4 552 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 EBF3Q9H4W6 596 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 UTS2RQ9UKP6 389 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 RAB21Q9UL25 225 aa3.68□□□□□ -1.82
VRK1-202ENST00000553683 FAM90A8PA6NJQ4 464 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 F5H423 210 aaPredicted RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 H3BNX3 289 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 NDUFB8O95169 186 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SYF2O95926 243 aaKnown RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 CRYABP02511 175 aaKnown RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 FAM90A13PP0C7W8 464 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 FAM90A24PP0C7X0 464 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SNHG28P0DPA3 235 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 CST5P28325 142 aaPredicted RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 SERPINA4P29622 427 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 CIITAP33076 1130 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 RAPGEF1Q13905 1077 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 PDCD2Q16342 344 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms