RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SCFD1Q8WVM8 642 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 PTCD3Q96EY7 689 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 PRICKLE1Q96MT3 831 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 C6orf50Q9HD87 102 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 HSPBP1Q9NZL4 362 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 PCDHGA7Q9Y5G6 932 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 COL17A1Q9UMD9 1497 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 GM2AP17900 193 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 IL10P22301 178 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 YAP1P46937 504 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 UBE3CQ15386 1083 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 CRTC2Q53ET0 693 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 STOX1Q6ZVD7 989 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 NIM1KQ8IY84 436 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 TDRD5Q8NAT2 981 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ADCY4Q8NFM4 1077 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ACTRT1Q8TDG2 376 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ACSF2Q96CM8 615 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF317Q96PQ6 595 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 UNKQ9C0B0 810 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 GHITMQ9H3K2 345 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 BLOC1S4Q9NUP1 217 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 COL4A3BPQ9Y5P4 624 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 LOC100506127A0A0U1RQW1 187 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM187AA6NFU0 413 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 DYRK3O43781 588 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 TTLL1O95922 423 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 CD58P19256 250 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 UGT2B15P54855 530 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RPL6Q02878 288 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ST3GAL1Q11201 340 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 DENND5BQ6ZUT9 1274 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 KCTD8Q6ZWB6 473 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 THEMISQ8N1K5 641 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC35G2Q8TBE7 412 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 VPS33BQ9H267 617 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 NIT2Q9NQR4 276 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 CPNE7Q9UBL6 633 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF451Q9Y4E5 1061 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 POLR1AO95602 1720 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 PER2O15055 1255 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 NUAK1O60285 661 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 GJB6O95452 261 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TMEM11P17152 192 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 AZGP1P25311 298 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 SRP54P61011 504 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 HTRA4P83105 476 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 RAD51Q06609 339 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 COL9A3Q14050 684 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZSWIM7Q19AV6 140 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZIK1Q3SY52 487 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 C12orf60Q5U649 245 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TTC39BQ5VTQ0 682 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 BROXQ5VW32 411 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 UGT3A1Q6NUS8 523 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CATSPER4Q7RTX7 472 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 PIWIL4Q7Z3Z4 852 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 IGFN1Q86VF2 1251 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 HPS6Q86YV9 775 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TMC8Q8IU68 726 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 KCNN1Q92952 543 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CMTM5Q96DZ9 223 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 AK8Q96MA6 479 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 RPRD1AQ96P16 312 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 KRT84Q9NSB2 600 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF532Q9HCE3 1301 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CTDNEP1O95476 244 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 GAP43P17677 238 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TNNI3P19429 210 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 BNC1Q01954 994 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 OTUD3Q5T2D3 398 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF557Q8N988 423 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 GANCQ8TET4 914 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 NR4A3Q92570 626 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 KIAA1143Q96AT1 154 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 PGM2Q96G03 612 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 COPZ2Q9P299 210 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TUBE1Q9UJT0 475 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 DENND2AQ9ULE3 1009 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TEX14Q8IWB6 1497 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZMYM2Q9UBW7 1377 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 hCG_2039718K7EN88 272 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TRDMT1O14717 391 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TKTL1P51854 596 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 MINDY4Q4G0A6 757 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 AARS2Q5JTZ9 985 aaKnown RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 KLHDC7AQ5VTJ3 777 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 PGBD2Q6P3X8 592 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 GATAD2BQ8WXI9 593 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ROGDIQ9GZN7 287 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 ADGRE2Q9UHX3 823 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CHURC1-FNTBB4DL54 471 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 SHOXO15266 292 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 TBC1D4O60343 1298 aa9.17□□□□□ -0.94
GTF2A1-203ENST00000553612 CTRB1P17538 263 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms