RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 C9orf64Q5T6V5 341 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 RNF219Q5W0B1 726 aaPredicted RBP17.09■□□□□ 0.33
XRCC3-204ENST00000553361 LAYNQ6UX15 382 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 RPL10LQ96L21 214 aaKnown RBP17.09■□□□□ 0.33
XRCC3-204ENST00000553361 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 NEUROG2Q9H2A3 272 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.09■□□□□ 0.331e-5■□□□□ 9.3
XRCC3-204ENST00000553361 DDIT4Q9NX09 232 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 RALYQ9UKM9 306 aaKnown RBP17.09■□□□□ 0.33
XRCC3-204ENST00000553361 PCOLCE2Q9UKZ9 415 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 ANKRD6Q9Y2G4 727 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 SNX11Q9Y5W9 270 aa17.09■□□□□ 0.33
XRCC3-204ENST00000553361 AKAP13Q12802 2813 aa17.08■□□□□ 0.33
XRCC3-204ENST00000553361 CEP192Q8TEP8 1941 aa17.08■□□□□ 0.33
XRCC3-204ENST00000553361 A0A1W2PP55 124 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
XRCC3-204ENST00000553361 MID1O15344 667 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 CBFA2T3O75081 653 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 RNASEH2AO75792 299 aaKnown RBP17.08■□□□□ 0.32
XRCC3-204ENST00000553361 SRPRAP08240 638 aaKnown RBP17.08■□□□□ 0.32
XRCC3-204ENST00000553361 ABCB4P21439 1286 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 CD27P26842 260 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 PTK2Q05397 1052 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 SFSWAPQ12872 951 aaKnown RBP17.08■□□□□ 0.32
XRCC3-204ENST00000553361 CST6Q15828 149 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 OR6B2Q6IFH4 312 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 RAB44Q7Z6P3 723 aaPredicted RBP17.08■□□□□ 0.32
XRCC3-204ENST00000553361 CIR1Q86X95 450 aaPredicted RBP17.08■□□□□ 0.32
XRCC3-204ENST00000553361 KDM1BQ8NB78 822 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 RHBDD1Q8TEB9 315 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 SHC3Q92529 594 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 OMDQ99983 421 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 SERGEFQ9UGK8 458 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 CHD6Q8TD26 2715 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 KNL1Q8NG31 2342 aa17.08■□□□□ 0.32
XRCC3-204ENST00000553361 EDDM13A0A1B0GTR0 161 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 TMEM8BA6NDV4 472 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 GLI1P08151 1106 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 ZNF883P0CG24 379 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 SLC2A3P11169 496 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 PDGFRAP16234 1089 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 CCR1P32246 355 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 SLC8A1P32418 973 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 KRT9P35527 623 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 STK19P49842 368 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 GALCP54803 685 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 NME3Q13232 169 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 EIF4EBP2Q13542 120 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 SUZ12Q15022 739 aaKnown RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 EFHC1Q5JVL4 640 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 KIAA0895LQ68EN5 471 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 NCEH1Q6PIU2 408 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 USP30Q70CQ3 517 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 ADAT2Q7Z6V5 191 aaKnown RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 SLCO6A1Q86UG4 719 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 STK40Q8N2I9 435 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 C1orf131Q8NDD1 294 aaKnown RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 ZCCHC14Q8WYQ9 949 aaKnown RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 NOX5Q96PH1 765 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 FAM129BQ96TA1 746 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 DNAJC12Q9UKB3 198 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 AJAP1Q9UKB5 411 aaPredicted RBP17.07■□□□□ 0.32
XRCC3-204ENST00000553361 PCDHGC3Q9UN70 934 aa17.07■□□□□ 0.32
XRCC3-204ENST00000553361 GTPBP10A4D1E9 387 aaKnown RBP17.06■□□□□ 0.32
XRCC3-204ENST00000553361 HSF2BPO75031 334 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 IGHV4-34P06331 123 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 PNMA6AP0CW24 399 aaPredicted RBP17.06■□□□□ 0.32
XRCC3-204ENST00000553361 MZF1P28698 734 aaPredicted RBP17.06■□□□□ 0.32
XRCC3-204ENST00000553361 NNMTP40261 264 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 PSMD8P48556 350 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 ARID5BQ14865 1188 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 KCNT1Q5JUK3 1230 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 FBXL22Q6P050 247 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 C11orf57Q6ZUT1 292 aaPredicted RBP17.06■□□□□ 0.32
XRCC3-204ENST00000553361 FAM183BPQ6ZVS7 135 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 SLC47A2Q86VL8 602 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 ADAMTS14Q8WXS8 1223 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 SLC2A13Q96QE2 648 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 ORAI3Q9BRQ5 295 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 SYNCQ9H7C4 482 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 OSGEPQ9NPF4 335 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 PLCB1Q9NQ66 1216 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 ASNSD1Q9NWL6 643 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
XRCC3-204ENST00000553361 NUMA1Q14980 2115 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 ZZEF1O43149 2961 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 CKAP5Q14008 2032 aa17.06■□□□□ 0.32
XRCC3-204ENST00000553361 FAM221BA6H8Z2 402 aa17.05■□□□□ 0.32
XRCC3-204ENST00000553361 LRRC72A6NJI9 287 aa17.05■□□□□ 0.32
XRCC3-204ENST00000553361 GOLGA8CPA6NN73 597 aa17.05■□□□□ 0.32
XRCC3-204ENST00000553361 IL1BP01584 269 aa17.05■□□□□ 0.32
XRCC3-204ENST00000553361 ERBB2P04626 1255 aa17.05■□□□□ 0.32
XRCC3-204ENST00000553361 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
XRCC3-204ENST00000553361 VAV1P15498 845 aa17.05■□□□□ 0.32
XRCC3-204ENST00000553361 CLCN1P35523 988 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms