RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 FZD1Q9UP38 647 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 MFHAS1Q9Y4C4 1052 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 TRIP11Q15643 1979 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 RNF103O00237 685 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 GLDCP23378 1020 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 SPRP35270 261 aaPredicted RBP17.96■□□□□ 0.47
SYNE3-202ENST00000553340 ARL4AP40617 200 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 SPANXN3Q5MJ09 141 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 PLD6Q8N2A8 252 aaKnown RBP17.96■□□□□ 0.47
SYNE3-202ENST00000553340 TDRD5Q8NAT2 981 aaKnown RBP17.96■□□□□ 0.47
SYNE3-202ENST00000553340 KYQ8NBH2 561 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 MAPK15Q8TD08 544 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 CENPIQ92674 756 aaPredicted RBP17.96■□□□□ 0.47
SYNE3-202ENST00000553340 PGBD4Q96DM1 585 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.47
SYNE3-202ENST00000553340 PACSIN3Q9UKS6 424 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 PHF24Q9UPV7 400 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 LZTS1Q9Y250 596 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 LOC285556D6RIA3 1793 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 ASLP04424 464 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 TFAP2AP05549 437 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 GOT1P17174 413 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 MAGEA12P43365 314 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 PHKA2P46019 1235 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 NUMBP49757 651 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 ZFP1Q6P2D0 407 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 CES3Q6UWW8 571 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 NAPRTQ6XQN6 538 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 RBM44Q6ZP01 1051 aaKnown RBP17.96■□□□□ 0.47
SYNE3-202ENST00000553340 ISL2Q96A47 359 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 OR52B2Q96RD2 323 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 RBBP8Q99708 897 aa17.96■□□□□ 0.47
SYNE3-202ENST00000553340 RGSL1A5PLK6 1076 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 TRIM13O60858 407 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 GABBR2O75899 941 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 PIK3R1P27986 724 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 FLOT2Q14254 428 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 SAMD7Q7Z3H4 446 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 CCDC185Q8N715 623 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 ZFRQ96KR1 1074 aaKnown RBP17.95■□□□□ 0.46
SYNE3-202ENST00000553340 NFKBIZQ9BYH8 718 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 PDZD7Q9H5P4 517 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 UBAP1Q9NZ09 502 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 G3V2L1 256 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 H2AFYO75367 372 aaKnown RBP17.95■□□□□ 0.46
SYNE3-202ENST00000553340 ARIH2O95376 493 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 PSMB4P28070 264 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 RANBP1P43487 201 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 CLCN2P51788 898 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 B3GNT6Q6ZMB0 384 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 BNC2Q6ZN30 1099 aaPredicted RBP17.95■□□□□ 0.46
SYNE3-202ENST00000553340 LCA5Q86VQ0 697 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 SNX32Q86XE0 403 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 AGR3Q8TD06 166 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 P2RY11Q96G91 374 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 ATXN7L3BQ96GX2 97 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 CNDP1Q96KN2 507 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 ILKAPQ9H0C8 392 aaPredicted RBP17.95■□□□□ 0.46
SYNE3-202ENST00000553340 PLK2Q9NYY3 685 aa17.95■□□□□ 0.46
SYNE3-202ENST00000553340 PTPRFP10586 1907 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 VILLO15195 856 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 STRNO43815 780 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 PEX10O60683 326 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 TNFAIP8O95379 198 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 CRTAMO95727 393 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 MPOP05164 745 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 LIMK2P53671 638 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 TTLL12Q14166 644 aaPredicted RBP17.94■□□□□ 0.46
SYNE3-202ENST00000553340 ADGRE1Q14246 886 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 KYAT1Q16773 422 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 FAM187BQ17R55 369 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 HSP90AA5PQ58FG0 334 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 SLC26A9Q7LBE3 791 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 STRA8Q7Z7C7 330 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 DSELQ8IZU8 1212 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 RP9Q8TA86 221 aaKnown RBP17.94■□□□□ 0.46
SYNE3-202ENST00000553340 CPB2Q96IY4 423 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 CDRT15Q96T59 188 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 MRPS26Q9BYN8 205 aaKnown RBP17.94■□□□□ 0.46
SYNE3-202ENST00000553340 AP4B1Q9Y6B7 739 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 USP3Q9Y6I4 520 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 A0A096LPK6 155 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 MRPS22P82650 360 aaKnown RBP17.94■□□□□ 0.46
SYNE3-202ENST00000553340 FSTL4Q6MZW2 842 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 AHI1Q8N157 1196 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 ADCY4Q8NFM4 1077 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 CLEC4CQ8WTT0 213 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 MRPL45Q9BRJ2 306 aaKnown RBP17.94■□□□□ 0.46
SYNE3-202ENST00000553340 CEP41Q9BYV8 373 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 SEPT10Q9P0V9 454 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 VPS28Q9UK41 221 aa17.94■□□□□ 0.46
SYNE3-202ENST00000553340 GOLGA8QA0A0J9YX86 632 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 GOLGA8OA6NCC3 632 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 CCDC160A6NGH7 325 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 GOLGA8NF8WBI6 632 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 MFSD11O43934 449 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 HBP1O60381 514 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 TMCC1O94876 653 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 SRGAP2BP0DMP2 458 aa17.93■□□□□ 0.46
SYNE3-202ENST00000553340 TBC1D25Q3MII6 688 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms