RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MMEP08473 750 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 TFE3P19532 575 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 CSRP1P21291 193 aaKnown RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 PMLP29590 882 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 CDH5P33151 784 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 MATKP42679 507 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 IRAK1P51617 712 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 ECT2LQ008S8 904 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 CENPCQ03188 943 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 AUHQ13825 339 aaKnown RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 HNRNPA1L2Q32P51 320 aaKnown RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 RABGAP1LQ5R372 815 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 OTUD1Q5VV17 481 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 RNF219Q5W0B1 726 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 ZNF776Q68DI1 518 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 C14orf80Q86SX3 495 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 ERICH1Q86X53 443 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 HDDC3Q8N4P3 179 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 GANCQ8TET4 914 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 CPA5Q8WXQ8 436 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 SNX19Q92543 992 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 RPRD1AQ96P16 312 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 NPY6RQ99463 290 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 ADAM33Q9BZ11 813 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 GANQ9H2C0 597 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 C6orf106Q9H6K1 298 aaPredicted RBP16.4■□□□□ 0.22
CDK4-215ENST00000553237 FBRSQ9HAH7 460 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 PIGVQ9NUD9 493 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 ADAMTS9Q9P2N4 1935 aa16.4■□□□□ 0.22
CDK4-215ENST00000553237 MUC22E2RYF6 1773 aaPredicted RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 A0A1B0GTW7 788 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 GOLGA8SH3BPF8 625 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 OPHN1O60890 802 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 PAGE1O75459 146 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 GFPT2O94808 682 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 ADCY5O95622 1261 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 TPM2P07951 284 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 STK19P49842 368 aaPredicted RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 SULT1E1P49888 294 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 POLR2FP61218 127 aaKnown RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 ZBTB16Q05516 673 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 TYRO3Q06418 890 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 FKBP15Q5T1M5 1219 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 C9orf64Q5T6V5 341 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 FAM102AQ5T9C2 384 aaPredicted RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 NAA35Q5VZE5 725 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 XYLT1Q86Y38 959 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 ZDHHC17Q8IUH5 632 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 SLC20A1Q8WUM9 679 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 BTBD1Q9H0C5 482 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 RSPH9Q9H1X1 276 aaPredicted RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 FAM207AQ9NSI2 230 aaPredicted RBP16.39■□□□□ 0.21
CDK4-215ENST00000553237 SNX10Q9Y5X0 201 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 NUMA1Q14980 2115 aa16.39■□□□□ 0.21
CDK4-215ENST00000553237 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 EPHB6O15197 1021 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 BCAT2O15382 392 aaPredicted RBP16.38■□□□□ 0.21
CDK4-215ENST00000553237 RNASEH1O60930 286 aaKnown RBP16.38■□□□□ 0.21
CDK4-215ENST00000553237 SEMA4FO95754 770 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 CEACAM1P13688 526 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 GABRB2P47870 512 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 DEUP1Q05D60 604 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 GRIK2Q13002 908 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 SEMA3BQ13214 749 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 TTC31Q49AM3 519 aaPredicted RBP16.38■□□□□ 0.21
CDK4-215ENST00000553237 TTC39BQ5VTQ0 682 aaPredicted RBP16.38■□□□□ 0.21
CDK4-215ENST00000553237 CXorf57Q6NSI4 855 aaKnown RBP16.38■□□□□ 0.21
CDK4-215ENST00000553237 MMAAQ8IVH4 418 aaKnown RBP16.38■□□□□ 0.21
CDK4-215ENST00000553237 KDM1BQ8NB78 822 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 EPS8L1Q8TE68 723 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 TBCBQ99426 244 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 TKTL2Q9H0I9 626 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 WDCPQ9H6R7 721 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 ANLNQ9NQW6 1124 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 ANGPTL2Q9UKU9 493 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 STAP1Q9ULZ2 295 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 NCKAP1Q9Y2A7 1128 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 SLCO1B1Q9Y6L6 691 aa16.38■□□□□ 0.21
CDK4-215ENST00000553237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.37■□□□□ 0.21
CDK4-215ENST00000553237 EDDM13A0A1B0GTR0 161 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 TARSL2A2RTX5 802 aaKnown RBP16.37■□□□□ 0.21
CDK4-215ENST00000553237 FAM47DPA6NHR8 397 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 MID1O15344 667 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 FSBPO95073 299 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 LSM8O95777 96 aaKnown RBP16.37■□□□□ 0.21
CDK4-215ENST00000553237 C7P10643 843 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 VAV1P15498 845 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 ZNF18P17022 549 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 CXCR3P49682 368 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 COPB1P53618 953 aaKnown RBP16.37■□□□□ 0.21
CDK4-215ENST00000553237 NOMO3P69849 1222 aa16.37■□□□□ 0.21
CDK4-215ENST00000553237 ZNF177Q13360 481 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms