RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 IGDCC3Q8IVU1 814 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 GSTCDQ8NEC7 633 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 GSDMBQ8TAX9 411 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 PPP4R1Q8TF05 950 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 LENG1Q96BZ8 264 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 PPP1R14BQ96C90 147 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 KCNK16Q96T55 309 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CCL15-CCL14A0A0B4J2E2 113 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 PABPN1LA6NDY0 278 aaKnown RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 KDM1AO60341 852 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 APOEP02649 317 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 STAG3L1P0CL83 205 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 GRK2P25098 689 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 GABRB2P47870 512 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 HSPA13P48723 471 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 GRB14Q14449 540 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ADRM1Q16186 407 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 CCL15Q16663 113 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SLC10A6Q3KNW5 377 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 PTPN20Q4JDL3 420 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 FSCBQ5H9T9 825 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ZNF484Q5JVG2 852 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 KLC3Q6P597 504 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 B3GNT6Q6ZMB0 384 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 CDHR3Q6ZTQ4 885 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 NDUFAF2Q8N183 169 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 MARVELD2Q8N4S9 558 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 MCUQ8NE86 351 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ATP2A3Q93084 1043 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 RTP4Q96DX8 246 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ASIC4Q96FT7 647 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 MECRQ9BV79 373 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 OCEL1Q9H607 264 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 POPDC2Q9HBU9 364 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 VTA1Q9NP79 307 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ASNSD1Q9NWL6 643 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 DCAF16Q9NXF7 216 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SAE1Q9UBE0 346 aaPredicted RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 MORF4L1Q9UBU8 362 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SF3B1O75533 1304 aaKnown RBP eCLIP7.53□□□□□ -1.2
BEST3-212ENST00000553096 CCDC195A0A1B0GUA6 201 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ARHGAP10A1A4S6 786 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 DENRO43583 198 aaKnown RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 TSPAN1O60635 241 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 GLRA3O75311 464 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 PIAS1O75925 651 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 C1QAP02745 245 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 MMP3P08254 477 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 C6orf222P0C671 652 aaPredicted RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 CCDC166P0CW27 439 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 KITP10721 976 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 HOXD8P13378 290 aaPredicted RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 CYP3A5P20815 502 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 L1CAMP32004 1257 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SERPINB6P35237 376 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 PDE1BQ01064 536 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 TRIP10Q15642 601 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SMTNL2Q2TAL5 461 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SFT2D3Q587I9 215 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 RABGAP1LQ5R372 815 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 RGMBQ6NW40 437 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 CYS1Q717R9 158 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 GPR142Q7Z601 462 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ESX1Q8N693 406 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ARFGAP1Q8N6T3 406 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 SLC4A11Q8NBS3 891 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 DDI1Q8WTU0 396 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 C1orf74Q96LT6 269 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 MRPS26Q9BYN8 205 aaKnown RBP7.53□□□□□ -1.2
BEST3-212ENST00000553096 SLC13A1Q9BZW2 595 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 ELOVL4Q9GZR5 314 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 CDH22Q9UJ99 828 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 GJD2Q9UKL4 321 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 RAB26Q9ULW5 256 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 DTNAQ9Y4J8 743 aa7.53□□□□□ -1.2
BEST3-212ENST00000553096 HTTP42858 3142 aa7.52□□□□□ -1.2
BEST3-212ENST00000553096 C15orf38-AP3S2A0A0A6YYH1 394 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 FAM159BA6NKW6 160 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 H7C0C1 242 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 ITGB3P05106 788 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 CCDC130P13994 396 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 IL1R2P27930 398 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 RFC1P35251 1148 aaPredicted RBP7.52□□□□□ -1.21
BEST3-212ENST00000553096 ATP5OP48047 213 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 AQP4P55087 323 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 PLOD1Q02809 727 aaPredicted RBP7.52□□□□□ -1.21
BEST3-212ENST00000553096 MSLNQ13421 630 aaPredicted RBP7.52□□□□□ -1.21
BEST3-212ENST00000553096 NAB1Q13506 487 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 TRPC3Q13507 836 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 ITGA7Q13683 1181 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 CCNIQ14094 377 aa7.52□□□□□ -1.21
BEST3-212ENST00000553096 UBAP2LQ14157 1087 aaKnown RBP7.52□□□□□ -1.21
BEST3-212ENST00000553096 OGFRL1Q5TC84 451 aaPredicted RBP7.52□□□□□ -1.21
BEST3-212ENST00000553096 UGT2A3Q6UWM9 527 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms