RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 CACNA2D3Q8IZS8 1091 aa20.19■□□□□ 0.82
MTA1-220ENST00000552286 DCAKDQ8WVC6 231 aa20.19■□□□□ 0.82
MTA1-220ENST00000552286 LRRC39Q96DD0 335 aa20.19■□□□□ 0.82
MTA1-220ENST00000552286 SGSM3Q96HU1 749 aa20.19■□□□□ 0.82
MTA1-220ENST00000552286 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
MTA1-220ENST00000552286 MRPL17Q9NRX2 175 aaKnown RBP20.19■□□□□ 0.82
MTA1-220ENST00000552286 A0A1W2PPM1 405 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 PPP1R12AO14974 1030 aaPredicted RBP20.18■□□□□ 0.82
MTA1-220ENST00000552286 SPAG7O75391 227 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 STX2P32856 288 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 CTNNB1P35222 781 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 FDFT1P37268 417 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 DENND5BQ6ZUT9 1274 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 GDAP1Q8TB36 358 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 GPR152Q8TDT2 470 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 FERMT1Q9BQL6 677 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 TRIM62Q9BVG3 475 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 TKTL2Q9H0I9 626 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
MTA1-220ENST00000552286 SMG5Q9UPR3 1016 aaKnown RBP20.18■□□□□ 0.82
MTA1-220ENST00000552286 COL4A4P53420 1690 aaPredicted RBP20.18■□□□□ 0.82
MTA1-220ENST00000552286 STK10O94804 968 aaKnown RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 HAPLN1P10915 354 aaPredicted RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 CA8P35219 290 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 CORO7P57737 925 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 PDZD4Q76G19 769 aaPredicted RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 PIGWQ7Z7B1 504 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 C4orf33Q8N1A6 199 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 NUP93Q8N1F7 819 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 CCNYQ8ND76 341 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 DQX1Q8TE96 717 aaKnown RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 MZB1Q8WU39 189 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 CFAP36Q96G28 342 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 ZC3H7BQ9UGR2 993 aaKnown RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 GBF1Q92538 1859 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 MYO1CO00159 1063 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 RNF103O00237 685 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 OPHN1O60890 802 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 ZNF135P52742 658 aaPredicted RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 KBTBD12Q3ZCT8 623 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 YTHDF3Q7Z739 585 aaKnown RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 TP53INP2Q8IXH6 220 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 DENND1AQ8TEH3 1009 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 CABS1Q96KC9 395 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 XAB2Q9HCS7 855 aaKnown RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 AFF4Q9UHB7 1163 aaKnown RBP20.17■□□□□ 0.82
MTA1-220ENST00000552286 RAD54BQ9Y620 910 aa20.17■□□□□ 0.82
MTA1-220ENST00000552286 LINC01553A4QN01 128 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 GRXCR1A8MXD5 290 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 TCP11X1B4DZS4 312 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 IGLV3-25P01717 112 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 MYOGP15173 224 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 WDR4P57081 412 aaKnown RBP20.16■□□□□ 0.82
MTA1-220ENST00000552286 WASHC5Q12768 1159 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 FAM109BQ6ICB4 259 aaPredicted RBP20.16■□□□□ 0.82
MTA1-220ENST00000552286 ZNF461Q8TAF7 563 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 SLC44A1Q8WWI5 657 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 SIGLEC10Q96LC7 697 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 NSRP1Q9H0G5 558 aaKnown RBP20.16■□□□□ 0.82
MTA1-220ENST00000552286 PLAC1Q9HBJ0 212 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 SSU72Q9NP77 194 aaKnown RBP20.16■□□□□ 0.82
MTA1-220ENST00000552286 OR12D3Q9UGF7 316 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 TTLL3Q9Y4R7 772 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 PLXNA3P51805 1871 aa20.16■□□□□ 0.82
MTA1-220ENST00000552286 ZNF638Q14966 1978 aaKnown RBP20.16■□□□□ 0.82
MTA1-220ENST00000552286 TYROBPO43914 113 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 C1QAP02745 245 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 CTSAP10619 480 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 BMPR1AP36894 532 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 GRIA1P42261 906 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 SARNPP82979 210 aaKnown RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 CDK16Q00536 496 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 IFT88Q13099 833 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 EIF4EBP2Q13542 120 aaPredicted RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 SHHQ15465 462 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 PRPF39Q86UA1 669 aaKnown RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 MAGEB18Q96M61 343 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 EPAS1Q99814 870 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.15■□□□□ 0.822e-6■■■■□ 25.9
MTA1-220ENST00000552286 GREB1Q4ZG55 1949 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 TRDMT1O14717 391 aaKnown RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 ZNF189O75820 626 aaPredicted RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 KIAA0754O94854 1291 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 ABLIM3O94929 683 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 ASMTLO95671 621 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 CPP00450 1065 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 GSTA2P09210 222 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 KRT4P19013 534 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 USP46P62068 366 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 RPL10AP62906 217 aaKnown RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 IL9RQ01113 521 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 TPGS2Q68CL5 300 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 RNF34Q969K3 372 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 C17orf80Q9BSJ5 609 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 FBXO44Q9H4M3 255 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 ALG13Q9NP73 1137 aaKnown RBP20.15■□□□□ 0.82
MTA1-220ENST00000552286 ABCC13Q9NSE7 274 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 SEPT10Q9P0V9 454 aa20.15■□□□□ 0.82
MTA1-220ENST00000552286 SNX10Q9Y5X0 201 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms