RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ZNF623O75123 536 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 NCR1O76036 304 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ZFPL1O95159 310 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 RTN3O95197 1032 aaPredicted RBP5.87□□□□□ -1.47
CPSF6-206ENST00000550987 PDHA1P08559 390 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3HP0C7X1 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 CHRNA5P30532 468 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 PAFAH1B1P43034 410 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 VAV2P52735 878 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 CBFBQ13951 182 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 KRT32Q14532 448 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 GPR68Q15743 365 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 RABL3Q5HYI8 236 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3GQ6DHY5 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3CQ6IPX1 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ACAD10Q6JQN1 1059 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ARMC6Q6NXE6 501 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 LRRC55Q6ZSA7 311 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 DTX2Q86UW9 622 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3Q8IZP1 549 aaPredicted RBP5.87□□□□□ -1.47
CPSF6-206ENST00000550987 METTL25Q8N6Q8 603 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 POU5F2Q8N7G0 328 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 OVCA2Q8WZ82 227 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ZNF333Q96JL9 665 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 FAR2Q96K12 515 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 BARD1Q99728 777 aaKnown RBP5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ABHD16BQ9H3Z7 469 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ACAD9Q9H845 621 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 RMI1Q9H9A7 625 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 SUFUQ9UMX1 484 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TRIM17Q9Y577 477 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 PCDHA10Q9Y5I2 948 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 NSD3Q9BZ95 1437 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 DOT1LQ8TEK3 1739 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 FER1L6Q2WGJ9 1857 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 CPDO75976 1380 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 RNF123Q5XPI4 1314 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 A0A1W2PPH5 198 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 VWA3AA6NCI4 1184 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 SAC3D1A6NKF1 404 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 TCERG1O14776 1098 aaKnown RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 KIAA0355O15063 1070 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 SLC16A3O15427 465 aaKnown RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 DHHO43323 396 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 FIBPO43427 364 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 ZBED4O75132 1171 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 CDKL5O76039 1030 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 DDX58O95786 925 aaKnown RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 PPP3CBP16298 524 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 ZNF37AP17032 561 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 MMP8P22894 467 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 HTR7P34969 479 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 LIPAP38571 399 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 PDE1AP54750 535 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 IRX6P78412 446 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 MRPS5P82675 430 aaKnown RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 ZNF484Q5JVG2 852 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 SLC9C2Q5TAH2 1124 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 PIK3AP1Q6ZUJ8 805 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 TOM1L2Q6ZVM7 507 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 LRRC56Q8IYG6 542 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 FAM109AQ8N4B1 249 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 LRRC71Q8N4P6 559 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 FAM71DQ8N9W8 422 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 SUPT20HQ8NEM7 779 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 TOR1AIP2Q8NFQ8 470 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 R3HDM4Q96D70 268 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 RNF125Q96EQ8 232 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 PTCD3Q96EY7 689 aaKnown RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 TIGD1Q96MW7 591 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 PIGSQ96S52 555 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 DEF6Q9H4E7 631 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 PLEKHA2Q9HB19 425 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 TRIM36Q9NQ86 728 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 ORC3Q9UBD5 711 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 UBE2J1Q9Y385 318 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-206ENST00000550987 FBN3Q75N90 2809 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 DOPEY1Q5JWR5 2465 aa5.86□□□□□ -1.47
CPSF6-206ENST00000550987 TJP1Q07157 1748 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 MON2Q7Z3U7 1717 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 A0A087X0M5 115 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 A0A1B0GX30 115 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 SLC38A8A6NNN8 435 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 ZAR1LA6NP61 321 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 CTIFO43310 598 aaKnown RBP5.85□□□□□ -1.47
CPSF6-206ENST00000550987 TIMM44O43615 452 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 FAM20BO75063 409 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 GUCY1B2O75343 617 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 TSPY4P0CV99 314 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 TSPY10P0CW01 314 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 CREB1P16220 341 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 DDX6P26196 483 aaKnown RBP eCLIP5.85□□□□□ -1.47
CPSF6-206ENST00000550987 GRK5P34947 590 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 PCP4P48539 62 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 ATXN1P54253 815 aaKnown RBP5.85□□□□□ -1.47
CPSF6-206ENST00000550987 RPP30P78346 268 aaKnown RBP5.85□□□□□ -1.47
CPSF6-206ENST00000550987 ITIH3Q06033 890 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 TBCCQ15814 346 aa5.85□□□□□ -1.47
CPSF6-206ENST00000550987 NFIL3Q16649 462 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms