RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SYT11Q9BT88 431 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 SELENOOQ9BVL4 669 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 MKRN2Q9H000 416 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 CYP8B1Q9UNU6 501 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 GON4LQ3T8J9 2241 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 BCLAF3A2AJT9 711 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 ANKRD62A6NC57 917 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 C2CD4BA6NLJ0 364 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 PRR5-ARHGAP8B1AHC4 643 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 I6L893 689 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 AP5Z1O43299 807 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 CLDN11O75508 207 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 KRT3P12035 628 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 PDGFRAP16234 1089 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 TNFAIP3P21580 790 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 PTPN9P43378 593 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 IRAK1P51617 712 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 ATXN1P54253 815 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 UBASH3AP57075 661 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 ARHGAP8P85298 464 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 RPL6Q02878 288 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 CCDC6Q16204 474 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 CDO1Q16878 200 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 SPDYCQ5MJ68 293 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 PLA2G2CQ5R387 149 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 RNF219Q5W0B1 726 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 CXorf57Q6NSI4 855 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 METTL3Q86U44 580 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 FAM131BQ86XD5 332 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 CACUL1Q86Y37 369 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 TMPRSS6Q8IU80 811 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 FRMD1Q8N878 549 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 C12orf50Q8NA57 414 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 KDM1BQ8NB78 822 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 OR2T3Q8NH03 318 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 JOSD2Q8TAC2 188 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 PRCCQ92733 491 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 SIPA1Q96FS4 1042 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 ANLNQ9NQW6 1124 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 VPS45Q9NRW7 570 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 AIPL1Q9NZN9 384 aa17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 USP36Q9P275 1121 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ENDOD1O94919 500 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 GJB6O95452 261 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 SRPRAP08240 638 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF806P0C7X5 589 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ID4P47928 161 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 COPAP53621 1224 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ECT2LQ008S8 904 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF177Q13360 481 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 C15orf59Q2T9L4 293 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 C5orf22Q49AR2 442 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 E4F1Q66K89 784 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 LRRC31Q6UY01 552 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ARMCX6Q7L4S7 300 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 STRADAQ7RTN6 431 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 C14orf80Q86SX3 495 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 TMEFF1Q8IYR6 380 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 IQCDQ96DY2 449 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 HAPLN3Q96S86 360 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 PPP1R9BQ96SB3 815 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 NUP58Q9BVL2 599 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 CDV3Q9UKY7 258 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ERVW-1Q9UQF0 538 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 CHD5Q8TDI0 1954 aa17.75■□□□□ 0.43
CHMP1A-208ENST00000550102 ITIH6Q6UXX5 1313 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 TPM3P06753 285 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 ACADMP11310 421 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 GPD1P21695 349 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 SDHBP21912 280 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 RFC1P35251 1148 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 PBX1P40424 430 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 PRKCIP41743 596 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 DPP6P42658 865 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 PLK1P53350 603 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 CDH4P55283 916 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 SULT2A1Q06520 285 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 KLHL30Q0D2K2 578 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 ARID5BQ14865 1188 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 SF3A2Q15428 464 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 HNRNPA1L2Q32P51 320 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 ARL13BQ3SXY8 428 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 CCDC14Q49A88 953 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 AASDHQ4L235 1098 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 LYSMD4Q5XG99 296 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 ACAD10Q6JQN1 1059 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 ZNF683Q8IZ20 524 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 MCOLN2Q8IZK6 566 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 APCDD1Q8J025 514 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 MYO19Q96H55 970 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 MRGPRX3Q96LB0 322 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 C1orf74Q96LT6 269 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 MCEEQ96PE7 176 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 CD93Q9NPY3 652 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 PRSS16Q9NQE7 514 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 TMPRSS4Q9NRS4 437 aa17.74■□□□□ 0.43
CHMP1A-208ENST00000550102 IFNKQ9P0W0 207 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms