RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 MIS12Q9H081 205 aa14.06□□□□□ -0.16
TROAP-211ENST00000549891 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
TROAP-211ENST00000549891 MTG2Q9H4K7 406 aa14.06□□□□□ -0.16
TROAP-211ENST00000549891 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
TROAP-211ENST00000549891 INTS6Q9UL03 887 aaKnown RBP14.06□□□□□ -0.16
TROAP-211ENST00000549891 ERVW-1Q9UQF0 538 aa14.06□□□□□ -0.16
TROAP-211ENST00000549891 ITIH6Q6UXX5 1313 aa14.06□□□□□ -0.16
TROAP-211ENST00000549891 TRIM49BA6NDI0 452 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 ENC1O14682 589 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 CAPN9O14815 690 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 P4HA2O15460 535 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 GABBR2O75899 941 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 LUC7L3O95232 432 aaKnown RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 APOEP02649 317 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 ITGAVP06756 1048 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 BRD2P25440 801 aaKnown RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 SLC8A1P32418 973 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 PPP1R2P41236 205 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 ACADSBP45954 432 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 ARRB1P49407 418 aaPredicted RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 CCR5P51681 352 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 PMS1P54277 932 aaKnown RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 RPS24P62847 133 aaKnown RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 NUCB2P80303 420 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 ECT2LQ008S8 904 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 CCDC40Q4G0X9 1142 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 SOWAHCQ53LP3 525 aaPredicted RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 C9orf64Q5T6V5 341 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 DHRS13Q6UX07 377 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 SND1Q7KZF4 910 aaKnown RBP eCLIP14.05□□□□□ -0.16
TROAP-211ENST00000549891 BEND5Q7L4P6 421 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 FMR1NBQ8N0W7 255 aaPredicted RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 DQX1Q8TE96 717 aaKnown RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 LRIG1Q96JA1 1093 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 MRGPRX3Q96LB0 322 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 CEP63Q96MT8 703 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 NUCKS1Q9H1E3 243 aaKnown RBP14.05□□□□□ -0.16
TROAP-211ENST00000549891 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 TJP2Q9UDY2 1190 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 IGSF10Q6WRI0 2623 aa14.05□□□□□ -0.16
TROAP-211ENST00000549891 MYLKQ15746 1914 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 SHROOM3Q8TF72 1996 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 A0A087WV48 116 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 FAM149AA5PLN7 773 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 RNF225M0QZC1 329 aaPredicted RBP14.04□□□□□ -0.16
TROAP-211ENST00000549891 LDOC1O95751 146 aaPredicted RBP14.04□□□□□ -0.16
TROAP-211ENST00000549891 GOT1P17174 413 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 C5AR1P21730 350 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 PSMD8P48556 350 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 GCNT1Q02742 428 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 SULT2A1Q06520 285 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 SLC12A1Q13621 1099 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 ELAVL3Q14576 367 aaKnown RBP14.04□□□□□ -0.16
TROAP-211ENST00000549891 DCAF6Q58WW2 860 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 FSCBQ5H9T9 825 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 C6orf118Q5T5N4 469 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 CFAP52Q8N1V2 620 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 OXR1Q8N573 874 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 OR14C36Q8NHC7 312 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 SPATA20Q8TB22 786 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 NXPE2Q96DL1 559 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 SLC39A13Q96H72 371 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 DHTKD1Q96HY7 919 aaPredicted RBP14.04□□□□□ -0.16
TROAP-211ENST00000549891 CNDP2Q96KP4 475 aaKnown RBP14.04□□□□□ -0.16
TROAP-211ENST00000549891 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 GDPD2Q9HCC8 539 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 ST7Q9NRC1 585 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 SERGEFQ9UGK8 458 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 NAALADL1Q9UQQ1 740 aa14.04□□□□□ -0.16
TROAP-211ENST00000549891 TTC34A8MYJ7 566 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 RFPL3O75679 317 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 MOCS2O96007 188 aaPredicted RBP14.03□□□□□ -0.16
TROAP-211ENST00000549891 FYNP06241 537 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 JUPP14923 745 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 RPL34P49207 117 aaKnown RBP14.03□□□□□ -0.16
TROAP-211ENST00000549891 ADPRHP54922 357 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 OXCT1P55809 520 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 CHSY1Q86X52 802 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 MARCH9Q86YJ5 346 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 GATAD2AQ86YP4 633 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 LGI2Q8N0V4 545 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 SAP25Q8TEE9 199 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 SERAC1Q96JX3 654 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 BTN2A3PQ96KV6 586 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 PPP1R9BQ96SB3 815 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 KDM4CQ9H3R0 1056 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 SLC12A6Q9UHW9 1150 aa14.03□□□□□ -0.16
TROAP-211ENST00000549891 TBC1D3DA0A087WVF3 549 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 TBC1D3IA0A087WXS9 549 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 TBC1D3EA0A087X179 549 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 TBC1D3KA0A087X1G2 549 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 TBC1D3FA6NER0 549 aaPredicted RBP14.02□□□□□ -0.17
TROAP-211ENST00000549891 TBC1D3LB9A6J9 549 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 F5H5T6 163 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 MED7O43513 233 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 MAGEC1O60732 1142 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 IL1BP01584 269 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 WNT1P04628 370 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 TBC1D3HP0C7X1 549 aa14.02□□□□□ -0.17
TROAP-211ENST00000549891 TACR2P21452 398 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms