RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 TRIM4Q9C037 500 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 TMEM245Q9H330 911 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 METTL14Q9HCE5 456 aaKnown RBP12.69□□□□□ -0.38
DDX54-206ENST00000549271 ADAMTS1Q9UHI8 967 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 CLEC4EQ9ULY5 219 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 CTNND2Q9UQB3 1225 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 PCDHB1Q9Y5F3 818 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 LRRK2Q5S007 2527 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 C10orf142B7Z368 130 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 PMM2O15305 246 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 KLK10O43240 276 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 TIMM44O43615 452 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 MT-CO3P00414 261 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 CYBBP04839 570 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
DDX54-206ENST00000549271 FMO5P49326 533 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 SLC8A3P57103 927 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 ERVPABLB-1P60509 514 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 YWHAGP61981 247 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDX54-206ENST00000549271 RPS14P62263 151 aaKnown RBP12.68□□□□□ -0.38
DDX54-206ENST00000549271 PDE4CQ08493 712 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 EFEMP1Q12805 493 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 TRIP4Q15650 581 aaPredicted RBP12.68□□□□□ -0.38
DDX54-206ENST00000549271 ZNF394Q53GI3 561 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 KDM7AQ6ZMT4 941 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 BHLHA9Q7RTU4 235 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 PLD4Q96BZ4 506 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 CIPCQ9C0C6 399 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 EBF2Q9HAK2 575 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 MARCH2Q9P0N8 246 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 STOML2Q9UJZ1 356 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 NBPF19A0A087WUL8 3843 aa12.68□□□□□ -0.38
DDX54-206ENST00000549271 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
DDX54-206ENST00000549271 A0A1W2PR77 199 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 K7ENP7 123 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 ZBED1O96006 694 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 MPOP05164 745 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 RXRGP48443 463 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 ARRB1P49407 418 aaPredicted RBP12.67□□□□□ -0.38
DDX54-206ENST00000549271 ZNF445P59923 1031 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 BNIP3Q12983 259 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 KIAA1614Q5VZ46 1190 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 INO80CQ6PI98 192 aaPredicted RBP12.67□□□□□ -0.38
DDX54-206ENST00000549271 DENND1CQ8IV53 801 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 LSMEM2Q8N112 164 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 UBR7Q8N806 425 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 LMO3Q8TAP4 145 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 SKA1Q96BD8 255 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 SRRTQ9BXP5 876 aaKnown RBP12.67□□□□□ -0.38
DDX54-206ENST00000549271 FBRSQ9HAH7 460 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 ASCL3Q9NQ33 180 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 GDF3Q9NR23 364 aa12.67□□□□□ -0.38
DDX54-206ENST00000549271 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
DDX54-206ENST00000549271 SLC12A8A0AV02 714 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 XPO1O14980 1071 aaKnown RBP12.66□□□□□ -0.38
DDX54-206ENST00000549271 LATS1O95835 1130 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 DNTTP04053 509 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 HMBSP08397 361 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 CD38P28907 300 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 LSSP48449 732 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 TKTL1P51854 596 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
DDX54-206ENST00000549271 GABREP78334 506 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 E2F1Q01094 437 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 PAK1Q13153 545 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 CUL2Q13617 745 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 CDCP2Q5VXM1 449 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 RSRC2Q7L4I2 434 aaKnown RBP12.66□□□□□ -0.38
DDX54-206ENST00000549271 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 SCML4Q8N228 414 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 ZNF366Q8N895 744 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
DDX54-206ENST00000549271 FAM117AQ9C073 453 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 ERVMER34-1Q9H9K5 563 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 PRSS16Q9NQE7 514 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 ANKMY1Q9P2S6 941 aa12.66□□□□□ -0.38
DDX54-206ENST00000549271 HBS1LQ9Y450 684 aaKnown RBP12.66□□□□□ -0.38
DDX54-206ENST00000549271 TEP1Q99973 2627 aaKnown RBP12.66□□□□□ -0.38
DDX54-206ENST00000549271 SPTAN1Q13813 2472 aaKnown RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 WNT9AO14904 365 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 HOXD9P28356 352 aaPredicted RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 HARS2P49590 506 aaKnown RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 GALCP54803 685 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 NXPH1P58417 271 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 LRMPQ12912 555 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 NFATC3Q12968 1075 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 MPPE1Q53F39 396 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 USP30Q70CQ3 517 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
DDX54-206ENST00000549271 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX54-206ENST00000549271 WFIKKN2Q8TEU8 576 aa12.65□□□□□ -0.38
DDX54-206ENST00000549271 DDI1Q8WTU0 396 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms