RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 TMEM74BQ9NUR3 256 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 DDX56Q9NY93 547 aaKnown RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 HESX1Q9UBX0 185 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 NME7Q9Y5B8 376 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 A8MXQ7 604 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 DDX6P26196 483 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■■□□ 18.3
CTDSP2-204ENST00000548823 PTPN7P35236 360 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 PLA2G4AP47712 749 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 RPL34P49207 117 aaKnown RBP20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 FAM193AP78312 1265 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 OGDHQ02218 1023 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 GOLGA7BQ2TAP0 167 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 PPP1R26Q5T8A7 1209 aaPredicted RBP20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 AADACL2Q6P093 401 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 ACOT1Q86TX2 421 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 ZDHHC17Q8IUH5 632 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 MAB21L3Q8N8X9 362 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 SLC35F5Q8WV83 523 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 CASKIN2Q8WXE0 1202 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 SLCO2A1Q92959 643 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 RBM41Q96IZ5 413 aaKnown RBP20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 TNIP3Q96KP6 325 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 FAM114A2Q9NRY5 505 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 AMACRQ9UHK6 382 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 ACACAQ13085 2346 aa20.69■□□□□ 0.9
CTDSP2-204ENST00000548823 ATF6P18850 670 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 TYMPP19971 482 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 RFC1P35251 1148 aaPredicted RBP20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 SCNN1AP37088 669 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 ATXN3P54252 364 aaPredicted RBP20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 TAF12Q16514 161 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 DSTYKQ6XUX3 929 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 TMEM110Q86TL2 294 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 ANKRD52Q8NB46 1076 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 MDGA1Q8NFP4 955 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 RIN3Q8TB24 985 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 ADAM32Q8TC27 787 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 SEPT5Q99719 369 aaPredicted RBP20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 CACNA2D2Q9NY47 1150 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 MBD1Q9UIS9 605 aaPredicted RBP20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 RASAL2Q9UJF2 1139 aa20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 UTP11Q9Y3A2 253 aaKnown RBP20.68■□□□□ 0.9
CTDSP2-204ENST00000548823 GABRDO14764 452 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 GJB6O95452 261 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 RARAP10276 462 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 PTGIRP43119 386 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 CARSP49589 748 aaKnown RBP20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 DR1Q01658 176 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 GPS2Q13227 327 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 MGAT5BQ3V5L5 792 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 SPDYCQ5MJ68 293 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 TMEM150AQ86TG1 271 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 TTC30AQ86WT1 665 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 ADGRF2Q8IZF7 708 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 TMEM86AQ8N2M4 240 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 MREGQ8N565 214 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 C12orf29Q8N999 325 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 UBA3Q8TBC4 463 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 USP33Q8TEY7 942 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 MAGOHBQ96A72 148 aaKnown RBP20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 NCAPGQ9BPX3 1015 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 SCUBE2Q9NQ36 999 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 ADAMTS9Q9P2N4 1935 aa20.67■□□□□ 0.9
CTDSP2-204ENST00000548823 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 GOLGA8SH3BPF8 625 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 TTI1O43156 1089 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 MAP3K13O43283 966 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 OPHN1O60890 802 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 PSMA2P25787 234 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 HOXD12P35452 270 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 COILP38432 576 aaPredicted RBP20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 P2RY2P41231 377 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 PTGER3P43115 390 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 BCAT1P54687 386 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 MRPS25P82663 173 aaKnown RBP20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 BST2Q10589 180 aaKnown RBP20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 KLF1Q13351 362 aaPredicted RBP20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 HADHQ16836 314 aaKnown RBP20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 ARCQ7LC44 396 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 TMEFF1Q8IYR6 380 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 JOSD2Q8TAC2 188 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 LRIG1Q96JA1 1093 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 FAM129AQ9BZQ8 928 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 METTL5Q9NRN9 209 aaKnown RBP20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 TJP2Q9UDY2 1190 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 EFR3BQ9Y2G0 817 aa20.66■□□□□ 0.9
CTDSP2-204ENST00000548823 PLXNB3Q9ULL4 1909 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 F8VP50 259 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 CYB561D2O14569 222 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 ALDH1A2O94788 518 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 F11P03951 625 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 KRT7P08729 469 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 ACADSBP45954 432 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 CRY1Q16526 586 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 PEAR1Q5VY43 1037 aaPredicted RBP20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 DUPD1Q68J44 220 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 SYDE1Q6ZW31 735 aaPredicted RBP20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 ARMCX6Q7L4S7 300 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 GIPC2Q8TF65 315 aa20.65■□□□□ 0.9
CTDSP2-204ENST00000548823 OSCP1Q8WVF1 389 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms