RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CCDC14Q49A88 953 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 PMS2CLQ68D20 193 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 TCEAL6Q6IPX3 200 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 ZNF571Q7Z3V5 609 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 TMPRSS6Q8IU80 811 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 ZNF557Q8N988 423 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 TCEAL3Q969E4 200 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 PGAP3Q96FM1 320 aaPredicted RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 RPL10LQ96L21 214 aaKnown RBP16.27■□□□□ 0.2
DDX54-205ENST00000548786 MCEEQ96PE7 176 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 TTYH3Q9C0H2 523 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 MYO6Q9UM54 1294 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 PAXBP1Q9Y5B6 917 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 RALGAPA1Q6GYQ0 2036 aa16.27■□□□□ 0.2
DDX54-205ENST00000548786 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.26■□□□□ 0.19
DDX54-205ENST00000548786 IGHV1OR15-9A0A0B4J2B8 117 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 C2CD4BA6NLJ0 364 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 MOCS3O95396 460 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 RRM1P23921 792 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 PTGER3P43115 390 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 COPAP53621 1224 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 ST8SIA6P61647 398 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
DDX54-205ENST00000548786 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 ZNF177Q13360 481 aaPredicted RBP16.26■□□□□ 0.19
DDX54-205ENST00000548786 PLEKHG6Q3KR16 790 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 ALFQ53S48 1182 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 TTC39BQ5VTQ0 682 aaPredicted RBP16.26■□□□□ 0.19
DDX54-205ENST00000548786 RNF219Q5W0B1 726 aaPredicted RBP16.26■□□□□ 0.19
DDX54-205ENST00000548786 ACAD10Q6JQN1 1059 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 CXorf57Q6NSI4 855 aaKnown RBP16.26■□□□□ 0.19
DDX54-205ENST00000548786 LPCAT2Q7L5N7 544 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 CYP2U1Q7Z449 544 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 TFAP2DQ7Z6R9 452 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 FAM124AQ86V42 546 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 OR52K2Q8NGK3 314 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 FAM172AQ8WUF8 416 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 SYT11Q9BT88 431 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 MPP6Q9NZW5 540 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 ERVW-1Q9UQF0 538 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 LAMA1P25391 3075 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 CEP250Q9BV73 2442 aa16.26■□□□□ 0.19
DDX54-205ENST00000548786 CKAP5Q14008 2032 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 TTC34A8MYJ7 566 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 GDF9O60383 454 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 GPD1P21695 349 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 PBX1P40424 430 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 RPL7AP62424 266 aaKnown RBP16.25■□□□□ 0.19
DDX54-205ENST00000548786 ECT2LQ008S8 904 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 BYSLQ13895 437 aaKnown RBP16.25■□□□□ 0.19
DDX54-205ENST00000548786 E2F5Q15329 346 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 TDRD12Q587J7 1177 aaKnown RBP16.25■□□□□ 0.19
DDX54-205ENST00000548786 WDR59Q6PJI9 974 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 PRR23CQ6ZRP0 262 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 BNIPLQ7Z465 357 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 C11orf74Q86VG3 221 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 MCOLN2Q8IZK6 566 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 PIGKQ92643 395 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 PRCCQ92733 491 aaPredicted RBP16.25■□□□□ 0.19
DDX54-205ENST00000548786 TTC17Q96AE7 1141 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 SIPA1Q96FS4 1042 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 LOXL4Q96JB6 756 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 MRGPRX3Q96LB0 322 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 MAGEB5Q9BZ81 275 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 XPO4Q9C0E2 1151 aaKnown RBP16.25■□□□□ 0.19
DDX54-205ENST00000548786 MUC3BQ9H195 1237 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 PRSS16Q9NQE7 514 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 AIPL1Q9NZN9 384 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 SLCO3A1Q9UIG8 710 aa16.25■□□□□ 0.19
DDX54-205ENST00000548786 ANKRD62A6NC57 917 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 E9PAM4 449 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 CCP110O43303 1012 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 ZNF217O75362 1048 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 ASLP04424 464 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 ACADMP11310 421 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 MTA1Q13330 715 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 CAMK2GQ13555 558 aaPredicted RBP16.24■□□□□ 0.19
DDX54-205ENST00000548786 CSRP2Q16527 193 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 RSPO4Q2I0M5 234 aaPredicted RBP16.24■□□□□ 0.19
DDX54-205ENST00000548786 AASDHQ4L235 1098 aaPredicted RBP16.24■□□□□ 0.19
DDX54-205ENST00000548786 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 DCUN1D2Q6PH85 259 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 LRSAM1Q6UWE0 723 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 LRRC31Q6UY01 552 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 ARCQ7LC44 396 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 ZNF683Q8IZ20 524 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 CCDC185Q8N715 623 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 OR2T3Q8NH03 318 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 RMDN1Q96DB5 314 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 MYO19Q96H55 970 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 RXFP3Q9NSD7 469 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 VPS28Q9UK41 221 aa16.24■□□□□ 0.19
DDX54-205ENST00000548786 PLXND1Q9Y4D7 1925 aa16.23■□□□□ 0.19
DDX54-205ENST00000548786 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.23■□□□□ 0.19
DDX54-205ENST00000548786 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
DDX54-205ENST00000548786 SIGLEC16A6NMB1 481 aa16.23■□□□□ 0.19
DDX54-205ENST00000548786 PATE3B3GLJ2 98 aa16.23■□□□□ 0.19
DDX54-205ENST00000548786 DDX3XO00571 662 aaKnown RBP eCLIP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms