RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
SSH1-208ENST00000548522 CNDP2Q96KP4 475 aaKnown RBP17.06■□□□□ 0.32
SSH1-208ENST00000548522 AASDHPPTQ9NRN7 309 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 SLCO3A1Q9UIG8 710 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 NCKAP1Q9Y2A7 1128 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 CFAP46Q8IYW2 2715 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 A0A1W2PR77 199 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 VAV1P15498 845 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 SLC8A1P32418 973 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 ACADVLP49748 655 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 STK19P49842 368 aaPredicted RBP17.05■□□□□ 0.32
SSH1-208ENST00000548522 ADPRHP54922 357 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 YWHAEP62258 255 aaKnown RBP17.05■□□□□ 0.32
SSH1-208ENST00000548522 CDH18Q13634 790 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 DCAF6Q58WW2 860 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 MS4A13Q5J8X5 152 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 TAC4Q86UU9 113 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 APCDD1Q8J025 514 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 STK40Q8N2I9 435 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 EID2Q8N6I1 236 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 OR2T34Q8NGX1 318 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 FAM129BQ96TA1 746 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 SCML1Q9UN30 329 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 ERVW-1Q9UQF0 538 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 NAALADL1Q9UQQ1 740 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 PCDHB4Q9Y5E5 795 aa17.05■□□□□ 0.32
SSH1-208ENST00000548522 TP53BP1Q12888 1972 aaPredicted RBP17.05■□□□□ 0.32
SSH1-208ENST00000548522 FLNBO75369 2602 aaKnown RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 TLX3O43711 291 aaPredicted RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 LUC7L3O95232 432 aaKnown RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 MBD3O95983 291 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 ASLP04424 464 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 ITGAVP06756 1048 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 PAEPP09466 180 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 ABCB4P21439 1286 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 EPHA8P29322 1005 aaPredicted RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 TMPRSS12Q86WS5 348 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 CIR1Q86X95 450 aaPredicted RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 SLC39A13Q96H72 371 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 RPL10LQ96L21 214 aaKnown RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 OMDQ99983 421 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 ARMCX3Q9UH62 379 aaPredicted RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 ADAMTS1Q9UHI8 967 aa17.04■□□□□ 0.32
SSH1-208ENST00000548522 COL5A1P20908 1838 aaPredicted RBP17.04■□□□□ 0.32
SSH1-208ENST00000548522 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 LRRC72A6NJI9 287 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 RNASEH1O60930 286 aaKnown RBP17.03■□□□□ 0.32
SSH1-208ENST00000548522 RFPL3O75679 317 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 LDOC1O95751 146 aaPredicted RBP17.03■□□□□ 0.32
SSH1-208ENST00000548522 CD38P28907 300 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 ABCG1P45844 678 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 FMO5P49326 533 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 NXPH1P58417 271 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 SEMG2Q02383 582 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 BNIP3Q12983 259 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 ARID5BQ14865 1188 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 CNGA2Q16280 664 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 HES3Q5TGS1 186 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 SYPL2Q5VXT5 272 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 RAP1GAP2Q684P5 730 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 OR14C36Q8NHC7 312 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 AZIN2Q96A70 460 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 NXPE2Q96DL1 559 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 SERAC1Q96JX3 654 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 TSG101Q99816 390 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 IRX2Q9BZI1 471 aaPredicted RBP17.03■□□□□ 0.32
SSH1-208ENST00000548522 GDF3Q9NR23 364 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 KIAA1257Q9ULG3 409 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 FZD4Q9ULV1 537 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 TLR6Q9Y2C9 796 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 CEP83Q9Y592 693 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 PCDHGA1Q9Y5H4 931 aa17.03■□□□□ 0.32
SSH1-208ENST00000548522 EDDM13A0A1B0GTR0 161 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 TYW5A2RUC4 315 aaKnown RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 DFNA5O60443 496 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 JUPP14923 745 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 MZF1P28698 734 aaPredicted RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 DRD3P35462 400 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 CCR5P51681 352 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 PITX1P78337 314 aaPredicted RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 FKBP3Q00688 224 aaKnown RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 ECT2LQ008S8 904 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 TARDBPQ13148 414 aaKnown RBP eCLIP17.02■□□□□ 0.326e-6■■■□□ 19.2
SSH1-208ENST00000548522 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 SPATS2Q86XZ4 545 aaKnown RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 LGI2Q8N0V4 545 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 ZNF557Q8N988 423 aaPredicted RBP17.02■□□□□ 0.32
SSH1-208ENST00000548522 PTPRN2Q92932 1015 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 FAM149B1Q96BN6 582 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 SERPINB11Q96P15 392 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 NT5C1BQ96P26 610 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 CAAP1Q9H8G2 361 aa17.02■□□□□ 0.32
SSH1-208ENST00000548522 ASH1LQ9NR48 2969 aaKnown RBP17.01■□□□□ 0.31
SSH1-208ENST00000548522 TARSL2A2RTX5 802 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms