RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 PDE11AQ9HCR9 933 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 SEMA4GQ9NTN9 838 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 MTMR4Q9NYA4 1195 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 TFCP2L1Q9NZI6 479 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 AFG3L2Q9Y4W6 797 aa4.56□□□□□ -1.68
PTCH1-216ENST00000548379 POLR2AP24928 1970 aaKnown RBP4.56□□□□□ -1.68
PTCH1-216ENST00000548379 PTPRTO14522 1441 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 FMN1Q68DA7 1419 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 RAPGEF6Q8TEU7 1601 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 DHX16O60231 1041 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 SGPL1O95470 568 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 RFPL3SP0C7P2 107 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 NR1H2P55055 460 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 DPTQ07507 201 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 MAPK7Q13164 816 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 G3BP1Q13283 466 aaKnown RBP eCLIP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 SLC14A1Q13336 389 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 SIM2Q14190 667 aaPredicted RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 KCNB1Q14721 858 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 MAPRE1Q15691 268 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 DENND1BQ6P3S1 775 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 OLFML1Q6UWY5 402 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 RTL10Q7L3V2 364 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 TSPYL6Q8N831 410 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 FAM98AQ8NCA5 519 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 SRFBP1Q8NEF9 429 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 ZNF398Q8TD17 642 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 ATP2A3Q93084 1043 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 MASTLQ96GX5 879 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 PPP1R10Q96QC0 940 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 FYTTD1Q96QD9 318 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 SEC62Q99442 399 aaKnown RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 DUSP26Q9BV47 211 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 PHF7Q9BWX1 381 aaPredicted RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 AGXT2Q9BYV1 514 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 GPR63Q9BZJ6 419 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 KLK15Q9H2R5 256 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 UNC45AQ9H3U1 944 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 PRDM13Q9H4Q3 707 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 IL17RBQ9NRM6 502 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 ARPP21Q9UBL0 812 aaPredicted RBP4.55□□□□□ -1.68
PTCH1-216ENST00000548379 CD207Q9UJ71 328 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 PNMA2Q9UL42 364 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 CFAP74Q9C0B2 1584 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 ZNF518AQ6AHZ1 1483 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 KAT6AQ92794 2004 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 BCORL1Q5H9F3 1711 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 TRAPPC8Q9Y2L5 1435 aa4.55□□□□□ -1.68
PTCH1-216ENST00000548379 CCDC196A0A1B0GTZ2 297 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 NPIPB13A6NJU9 1138 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 A6NLC8 198 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 NPIPB5A8MRT5 1133 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 TTC34A8MYJ7 566 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 NPIPB4C9JG80 1138 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 POC1B-GALNT4F8VUJ3 575 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 EPB41L2O43491 1005 aaKnown RBP4.54□□□□□ -1.68
PTCH1-216ENST00000548379 RAMP2O60895 175 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 CHRM5P08912 532 aaPredicted RBP4.54□□□□□ -1.68
PTCH1-216ENST00000548379 XBP1P17861 261 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 PRPH2P23942 346 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 AVPR2P30518 371 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 IDUAP35475 653 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 CLK3P49761 638 aaKnown RBP4.54□□□□□ -1.68
PTCH1-216ENST00000548379 INHBCP55103 352 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 ZXDAP98168 799 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 CDK18Q07002 472 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 DDX10Q13206 875 aaKnown RBP4.54□□□□□ -1.68
PTCH1-216ENST00000548379 VSTM1Q6UX27 236 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 HEATR4Q86WZ0 1026 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 RFX6Q8HWS3 928 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 GALNT4Q8N4A0 578 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 ENDOVQ8N8Q3 282 aaKnown RBP4.54□□□□□ -1.68
PTCH1-216ENST00000548379 PCYOX1LQ8NBM8 494 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 CCDC17Q96LX7 622 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 SENP7Q9BQF6 1050 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 HTATIP2Q9BUP3 242 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 SFXN1Q9H9B4 322 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 ASNSD1Q9NWL6 643 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 TLK1Q9UKI8 766 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 ZMYM4Q5VZL5 1548 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTCH1-216ENST00000548379 CNTLNQ9NXG0 1405 aa4.54□□□□□ -1.68
PTCH1-216ENST00000548379 FRMPD1Q5SYB0 1578 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 FAM90A7PA6NKC0 464 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 FAM90A22PA8MWA6 464 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 FAM90A12PA8MX19 464 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 FAM90A23PA8MXZ1 464 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 KLK10O43240 276 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 TOM1O60784 492 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 CNTN5O94779 1100 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 NHLRC4P0CG21 123 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 CYP2D6P10635 497 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 TNNT1P13805 278 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 ARSAP15289 507 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 PSMC2P35998 433 aaKnown RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 MVDP53602 400 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 SHC2P98077 582 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms