RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 MRGPRX3Q96LB0 322 aa24.43■■□□□ 1.5
PRDM4-202ENST00000547188 MYOCQ99972 504 aa24.43■■□□□ 1.5
PRDM4-202ENST00000547188 SLC25A18Q9H1K4 315 aa24.43■■□□□ 1.5
PRDM4-202ENST00000547188 STK17AQ9UEE5 414 aa24.43■■□□□ 1.5
PRDM4-202ENST00000547188 TPX2Q9ULW0 747 aaKnown RBP24.43■■□□□ 1.5
PRDM4-202ENST00000547188 USP3Q9Y6I4 520 aa24.43■■□□□ 1.5
PRDM4-202ENST00000547188 FRMD3A2A2Y4 597 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 CPED1A4D0V7 1026 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 CLIC2O15247 247 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 NOBOXO60393 691 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 NEBLO76041 1014 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 ALPPL2P10696 532 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 CCR10P46092 362 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 FOXK1P85037 733 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 TRIP4Q15650 581 aaPredicted RBP24.42■■□□□ 1.5
PRDM4-202ENST00000547188 CDKN3Q16667 212 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 STK40Q8N2I9 435 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 FAM26EQ8N5C1 309 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 WDR36Q8NI36 951 aaKnown RBP24.42■■□□□ 1.5
PRDM4-202ENST00000547188 TWNKQ96RR1 684 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 PNPLA8Q9NP80 782 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 NLGN3Q9NZ94 848 aa24.42■■□□□ 1.5
PRDM4-202ENST00000547188 TBL1XO60907 577 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 RTN2O75298 545 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 KRT38O76015 456 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 C5AR1P21730 350 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 CSKP41240 450 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 AFMP43652 599 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 CYP4F2P78329 520 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 KCNMA1Q12791 1236 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 RBM44Q6ZP01 1051 aaKnown RBP24.41■■□□□ 1.5
PRDM4-202ENST00000547188 LRRC4CQ9HCJ2 640 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 KLHL11Q9NVR0 708 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 DMTF1Q9Y222 760 aa24.41■■□□□ 1.5
PRDM4-202ENST00000547188 K7ESM1 405 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 IL1BP01584 269 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 NEFLP07196 543 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 DRD3P35462 400 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 CTSOP43234 321 aaPredicted RBP24.4■■□□□ 1.5
PRDM4-202ENST00000547188 HARS2P49590 506 aaKnown RBP24.4■■□□□ 1.5
PRDM4-202ENST00000547188 NCOA4Q13772 614 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 CLCA4Q14CN2 919 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 ZNF542PQ5EBM4 170 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 GUSBP11Q6P575 273 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 RFWD3Q6PCD5 774 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 TTC17Q96AE7 1141 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 GRAMD1AQ96CP6 724 aa24.4■■□□□ 1.5
PRDM4-202ENST00000547188 INTS6Q9UL03 887 aaKnown RBP24.4■■□□□ 1.5
PRDM4-202ENST00000547188 VNN1O95497 513 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 ADH1BP00325 375 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 SLC5A2P31639 672 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 ADGRF1Q5T601 910 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 RRAGBQ5VZM2 374 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 EFL1Q7Z2Z2 1120 aaKnown RBP24.39■■□□□ 1.49
PRDM4-202ENST00000547188 UNC93AQ86WB7 457 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 PLEKHO2Q8TD55 490 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 LMLNQ96KR4 655 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 AGPAT3Q9NRZ7 376 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 STIM2Q9P246 746 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 CCDC39Q9UFE4 941 aa24.39■■□□□ 1.49
PRDM4-202ENST00000547188 UBE4BO95155 1302 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.38■■□□□ 1.49
PRDM4-202ENST00000547188 TARSL2A2RTX5 802 aaKnown RBP24.38■■□□□ 1.49
PRDM4-202ENST00000547188 PRAMEF26H0Y7S4 382 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 ITGA2BP08514 1039 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 YWHAGP61981 247 aaKnown RBP eCLIP24.38■■□□□ 1.49
PRDM4-202ENST00000547188 ZNF177Q13360 481 aaPredicted RBP24.38■■□□□ 1.49
PRDM4-202ENST00000547188 DRAP1Q14919 205 aaPredicted RBP24.38■■□□□ 1.49
PRDM4-202ENST00000547188 KLK6Q92876 244 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 CALN1Q9BXU9 219 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 USP29Q9HBJ7 922 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 EVA1BQ9NVM1 165 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 GEMIN8Q9NWZ8 242 aaKnown RBP24.38■■□□□ 1.49
PRDM4-202ENST00000547188 SFMBT1Q9UHJ3 866 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 SLCO3A1Q9UIG8 710 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 ERVW-1Q9UQF0 538 aa24.38■■□□□ 1.49
PRDM4-202ENST00000547188 EDDM13A0A1B0GTR0 161 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 GOLGA6L7A0A1B0GV03 622 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 SCAMP1O15126 338 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 TGFB1I1O43294 461 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 STX6O43752 255 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 MZF1P28698 734 aaPredicted RBP24.37■■□□□ 1.49
PRDM4-202ENST00000547188 MLLT3P42568 568 aaPredicted RBP24.37■■□□□ 1.49
PRDM4-202ENST00000547188 ZNF445P59923 1031 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 SPOPLQ6IQ16 392 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 JAMLQ86YT9 394 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 XXYLT1Q8NBI6 393 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 NDRG1Q92597 394 aaKnown RBP24.37■■□□□ 1.49
PRDM4-202ENST00000547188 ZSCAN31Q96LW9 406 aaPredicted RBP24.37■■□□□ 1.49
PRDM4-202ENST00000547188 STOML2Q9UJZ1 356 aa24.37■■□□□ 1.49
PRDM4-202ENST00000547188 LRRK1Q38SD2 2015 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 CCDC187A0A096LP49 1063 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 SLC31A1O15431 190 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 ASLP04424 464 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 ARID5BQ14865 1188 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 SETMARQ53H47 684 aaPredicted RBP24.36■■□□□ 1.49
PRDM4-202ENST00000547188 MMS22LQ6ZRQ5 1243 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 VASH2Q86V25 355 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 MFN1Q8IWA4 741 aa24.36■■□□□ 1.49
PRDM4-202ENST00000547188 ZNF564Q8TBZ8 553 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms