RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 USP18Q9UMW8 372 aa7.56□□□□□ -1.2
CHPT1-203ENST00000546873 SIP14410 1827 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 IGKV6D-21A0A0A0MT36 114 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TTC26A0AVF1 554 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TMEM150BA6NC51 233 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 LRRIQ4A6NIV6 560 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 CLIC2O15247 247 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 MAPK13O15264 365 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 ALDH1A2O94788 518 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 GAAP10253 952 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TNNT1P13805 278 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 RGS2P41220 211 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 NPTX2P47972 431 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 GPR15P49685 360 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 LIG4P49917 911 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 KRT83P78385 493 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 GTF2BQ00403 316 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 PURAQ00577 322 aaKnown RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 SP2Q02086 613 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 GOLGA8FQ08AF8 430 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 GOLGA8DPQ0D2H9 430 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 PCBP1Q15365 356 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 EXOC3L4Q17RC7 722 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 LY6KQ17RY6 165 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 ARHGAP29Q52LW3 1261 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TDRD12Q587J7 1177 aaKnown RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 BRDTQ58F21 947 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 GJC2Q5T442 439 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 EGFLAMQ63HQ2 1017 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 PLPPR4Q7Z2D5 763 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 ZNF610Q8N9Z0 462 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 XXYLT1Q8NBI6 393 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 ATP8B4Q8TF62 1192 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 PSPC1Q8WXF1 523 aaKnown RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 CHFRQ96EP1 664 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 SPAG5Q96R06 1193 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 MNTQ99583 582 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TARS2Q9BW92 718 aaKnown RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TMX1Q9H3N1 280 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 KIAA1586Q9HCI6 787 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TRMT1Q9NXH9 659 aaKnown RBP7.55□□□□□ -1.2
CHPT1-203ENST00000546873 TBX20Q9UMR3 447 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 PPP2R2CQ9Y2T4 447 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 COL1A2P08123 1366 aa7.55□□□□□ -1.2
CHPT1-203ENST00000546873 MCM3APO60318 1980 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 GSTTP1A0A1W2PQM5 241 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 TGFB1I1O43294 461 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 KIF5CO60282 957 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 HBP1O60381 514 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 AKAP3O75969 853 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 ARIH2O95376 493 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 CCDC172P0C7W6 258 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MARK3P27448 753 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 PTGS2P35354 604 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 HOXD13P35453 343 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MATR3P43243 847 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 LSSP48449 732 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 EFNA5P52803 228 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 PHC1P78364 1004 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 CDK17Q00537 523 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 BFSP1Q12934 665 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MXD4Q14582 209 aaPredicted RBP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 SPA17Q15506 151 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MEA1Q16626 185 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 SDE2Q6IQ49 451 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 CCDC62Q6P9F0 684 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 SLC39A5Q6ZMH5 540 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 KIAA1328Q86T90 577 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 VPS36Q86VN1 386 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 TMEM161BQ8NDZ6 487 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MDGA1Q8NFP4 955 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 OR5M3Q8NGP4 307 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 KIF18AQ8NI77 898 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 TMEM174Q8WUU8 243 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 GAB3Q8WWW8 586 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 POMGNT1Q8WZA1 660 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 FAM193BQ96PV7 902 aaPredicted RBP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 SH2D3AQ9BRG2 576 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 STRA6Q9BX79 667 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 TSGA10Q9BZW7 698 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 TTYH3Q9C0H2 523 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 ABHD16BQ9H3Z7 469 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 DHX33Q9H6R0 707 aaKnown RBP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 PLCB1Q9NQ66 1216 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 SLC2A4RGQ9NR83 387 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MYO6Q9UM54 1294 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 SIK3Q9Y2K2 1263 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 MRPL42Q9Y6G3 142 aaKnown RBP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 FRMPD3Q5JV73 1810 aa7.54□□□□□ -1.2
CHPT1-203ENST00000546873 ZNFX1Q9P2E3 1918 aaKnown RBP7.54□□□□□ -1.2
CHPT1-203ENST00000546873 A0A0A6YYK5 440 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms